This page contains sequences with predicted cell-wall proteins from 177 published complete genomes.

We have focused on the following prediction methods:
  • PFAM Gram positive anchor domain [ PF00746 ] using the TC of the model
  • LPxTG-HMM from Boekhorst et al. [ Pubmed reference ] using the proposed bit score=5 as cutoff
  • Tripartite pattern from Janulczyk et al.[ Pubmed reference ] using text pattern matching
  • CW-PRED v1 results [ Pubmed reference ]


  • No signal peptide prediction Signal peptide prediction included
    Organism nameCW-PRED2PF00746Boekhorst et al.Janulczyk et al.CW-PREDCW-PRED2PF00746Boekhorst et al.Janulczyk et al.CW-PRED
    Acidothermus_cellulolyticus_11B
    1
    0
    4
    6
    1
    1
    0
    2
    2
    1
    Alkaliphilus_metalliredigens_QYMF
    0
    0
    0
    0
    0
    0
    0
    0
    0
    0
    Arthrobacter_aurescens_TC1
    7
    1
    7
    4
    2
    4
    1
    5
    3
    1
    Arthrobacter_FB24
    6
    0
    5
    4
    2
    3
    0
    4
    1
    1
    Aster_yellows_witches-broom_phytoplasma_AYWB
    0
    0
    1
    0
    0
    0
    0
    1
    0
    0
    Bacillus_amyloliquefaciens_FZB42
    1
    0
    2
    1
    1
    1
    0
    2
    1
    1
    Bacillus_anthracis_Ames
    8
    5
    10
    6
    7
    8
    5
    10
    6
    7
    Bacillus_anthracis_Ames_0581
    8
    5
    10
    6
    7
    8
    5
    10
    6
    7
    Bacillus_anthracis_str_Sterne
    10
    7
    13
    7
    9
    9
    6
    11
    6
    8
    Bacillus_cereus_ATCC14579
    12
    10
    15
    9
    11
    10
    8
    12
    7
    9
    Bacillus_cereus_ATCC_10987
    13
    8
    15
    9
    11
    13
    8
    14
    9
    11
    Bacillus_cereus_cytotoxis_NVH_391-98
    5
    5
    7
    5
    5
    5
    5
    7
    4
    5
    Bacillus_cereus_E33L
    13
    9
    16
    8
    12
    12
    9
    15
    8
    11
    Bacillus_clausii_KSM-K16
    5
    2
    7
    2
    3
    3
    1
    5
    1
    1
    Bacillus_halodurans
    9
    6
    9
    6
    8
    8
    5
    8
    5
    7
    Bacillus_licheniformis_ATCC_14580
    4
    1
    4
    2
    4
    3
    1
    3
    1
    3
    Bacillus_licheniformis_DSM_13
    4
    1
    4
    2
    4
    4
    1
    4
    2
    4
    Bacillus_pumilus_SAFR-032
    2
    2
    3
    1
    2
    1
    1
    1
    1
    1
    Bacillus_subtilis
    2
    1
    2
    2
    2
    1
    0
    1
    1
    1
    Bacillus_thuringiensis_Al_Hakam
    12
    10
    15
    10
    11
    12
    10
    15
    10
    11
    Bacillus_thuringiensis_konkukian
    10
    8
    12
    8
    9
    10
    8
    11
    8
    9
    Bacillus_weihenstephanensis_KBAB4
    11
    8
    12
    7
    9
    10
    7
    11
    6
    8
    Bifidobacterium_adolescentis_ATCC_15703
    3
    1
    6
    1
    2
    1
    1
    4
    1
    1
    Bifidobacterium_longum
    7
    3
    17
    1
    4
    5
    1
    11
    0
    2
    Caldicellulosiruptor_saccharolyticus_DSM_8903
    0
    0
    0
    0
    0
    0
    0
    0
    0
    0
    Carboxydothermus_hydrogenoformans_Z-2901
    0
    0
    0
    0
    0
    0
    0
    0
    0
    0
    Clavibacter_michiganensis_NCPPB_382
    12
    1
    11
    2
    9
    10
    1
    10
    2
    8
    Clostridium_acetobutylicum
    2
    1
    2
    2
    2
    2
    1
    2
    2
    2
    Clostridium_beijerinckii_NCIMB_8052
    0
    0
    0
    0
    0
    0
    0
    0
    0
    0
    Clostridium_botulinum_A
    1
    0
    1
    1
    1
    1
    0
    1
    1
    1
    Clostridium_botulinum_A_ATCC_19397
    1
    0
    1
    1
    1
    1
    0
    1
    1
    1
    Clostridium_botulinum_A_Hall
    1
    0
    1
    1
    1
    1
    0
    1
    1
    1
    Clostridium_botulinum_F_Langeland
    1
    1
    1
    1
    1
    1
    1
    1
    1
    1
    Clostridium_difficile_630
    1
    0
    3
    0
    1
    1
    0
    3
    0
    1
    Clostridium_kluyveri_DSM_555
    0
    0
    1
    0
    0
    0
    0
    0
    0
    0
    Clostridium_novyi_NT
    5
    3
    5
    5
    5
    5
    3
    5
    5
    5
    Clostridium_perfringens
    12
    4
    13
    11
    12
    12
    4
    12
    10
    12
    Clostridium_perfringens_ATCC_13124
    19
    8
    23
    17
    19
    17
    7
    20
    14
    17
    Clostridium_perfringens_SM101
    8
    2
    9
    7
    8
    8
    2
    8
    6
    8
    Clostridium_phytofermentans_ISDg
    2
    2
    4
    2
    2
    2
    2
    4
    2
    2
    Clostridium_tetani_E88
    4
    2
    3
    3
    3
    3
    2
    3
    3
    3
    Clostridium_thermocellum_ATCC_27405
    0
    0
    0
    0
    0
    0
    0
    0
    0
    0
    Corynebacterium_diphtheriae
    15
    6
    18
    5
    8
    15
    6
    17
    5
    8
    Corynebacterium_efficiens_YS-314
    8
    2
    8
    4
    4
    4
    1
    4
    2
    2
    Corynebacterium_glutamicum_ATCC_13032_Bielefeld
    1
    0
    0
    0
    1
    0
    0
    0
    0
    0
    Corynebacterium_glutamicum_ATCC_13032_Kitasato
    1
    0
    0
    0
    1
    0
    0
    0
    0
    0
    Corynebacterium_glutamicum_R
    4
    1
    6
    2
    2
    3
    1
    4
    1
    1
    Corynebacterium_jeikeium_K411
    6
    1
    9
    1
    1
    5
    1
    7
    1
    1
    Dehalococcoides_BAV1
    0
    0
    0
    0
    0
    0
    0
    0
    0
    0
    Dehalococcoides_CBDB1
    0
    0
    0
    0
    0
    0
    0
    0
    0
    0
    Dehalococcoides_ethenogenes_195
    2
    0
    1
    0
    2
    0
    0
    0
    0
    0
    Deinococcus_geothermalis_DSM_11300
    1
    0
    0
    0
    1
    0
    0
    0
    0
    0
    Deinococcus_radiodurans
    1
    0
    0
    1
    1
    0
    0
    0
    1
    0
    Desulfitobacterium_hafniense_Y51
    1
    0
    1
    0
    1
    0
    0
    0
    0
    0
    Desulfotomaculum_reducens_MI-1
    0
    0
    0
    0
    0
    0
    0
    0
    0
    0
    Enterococcus_faecalis_V583
    28
    24
    36
    21
    28
    21
    20
    27
    14
    21
    Frankia_alni_ACN14a
    4
    0
    2
    2
    4
    1
    0
    1
    1
    1
    Frankia_CcI3
    1
    0
    2
    1
    1
    0
    0
    1
    0
    0
    Geobacillus_kaustophilus_HTA426
    2
    2
    2
    2
    2
    2
    2
    2
    2
    2
    Geobacillus_thermodenitrificans_NG80-2
    1
    0
    1
    1
    1
    1
    0
    1
    1
    1
    Kineococcus_radiotolerans_SRS30216
    8
    0
    2
    1
    5
    2
    0
    1
    0
    1
    Lactobacillus_acidophilus_NCFM
    13
    8
    12
    10
    13
    4
    3
    4
    4
    4
    Lactobacillus_brevis_ATCC_367
    13
    0
    12
    4
    13
    11
    0
    11
    4
    11
    Lactobacillus_casei_ATCC_334
    17
    8
    21
    8
    17
    11
    4
    15
    5
    11
    Lactobacillus_delbrueckii_bulgaricus
    2
    2
    2
    1
    2
    0
    0
    0
    0
    0
    Lactobacillus_delbrueckii_bulgaricus_ATCC_BAA-365
    2
    1
    2
    1
    2
    0
    0
    0
    0
    0
    Lactobacillus_gasseri_ATCC_33323
    12
    7
    12
    10
    12
    6
    2
    6
    4
    6
    Lactobacillus_helveticus_DPC_4571
    2
    2
    2
    2
    2
    1
    1
    1
    1
    1
    Lactobacillus_johnsonii_NCC_533
    16
    14
    16
    14
    16
    9
    7
    9
    8
    9
    Lactobacillus_plantarum
    23
    8
    33
    15
    23
    19
    6
    28
    12
    19
    Lactobacillus_reuteri_F275
    5
    4
    5
    5
    5
    3
    2
    3
    3
    3
    Lactobacillus_sakei_23K
    4
    2
    5
    1
    4
    4
    2
    4
    0
    4
    Lactobacillus_salivarius_UCC118
    3
    2
    4
    2
    3
    3
    2
    4
    2
    3
    Lactococcus_lactis
    11
    5
    11
    6
    10
    5
    2
    7
    3
    5
    Lactococcus_lactis_cremoris_MG1363
    13
    4
    11
    8
    12
    7
    2
    8
    3
    7
    Lactococcus_lactis_cremoris_SK11
    9
    3
    9
    3
    8
    7
    3
    7
    3
    7
    Leifsonia_xyli_CTCB0
    4
    0
    4
    3
    1
    2
    0
    2
    2
    1
    Leuconostoc_mesenteroides_ATCC_8293
    5
    1
    6
    3
    5
    4
    1
    5
    2
    4
    Listeria_innocua
    31
    20
    37
    30
    31
    30
    20
    36
    29
    30
    Listeria_monocytogenes
    41
    21
    44
    34
    39
    40
    21
    43
    33
    38
    Listeria_monocytogenes_4b_F2365
    42
    26
    47
    33
    41
    38
    24
    43
    30
    37
    Listeria_welshimeri_serovar_6b_SLCC5334
    23
    16
    27
    21
    22
    21
    15
    25
    19
    20
    Mesoplasma_florum_L1
    0
    0
    0
    0
    0
    0
    0
    0
    0
    0
    Moorella_thermoacetica_ATCC_39073
    2
    0
    1
    1
    1
    1
    0
    0
    0
    0
    Mycobacterium_avium_104
    2
    0
    0
    1
    2
    0
    0
    0
    0
    0
    Mycobacterium_avium_paratuberculosis
    2
    0
    0
    1
    2
    0
    0
    0
    0
    0
    Mycobacterium_bovis
    1
    0
    0
    0
    1
    0
    0
    0
    0
    0
    Mycobacterium_bovis_BCG_Pasteur_1173P2
    1
    0
    0
    0
    1
    0
    0
    0
    0
    0
    Mycobacterium_gilvum_PYR-GCK
    2
    0
    0
    2
    2
    0
    0
    0
    0
    0
    Mycobacterium_JLS
    0
    0
    2
    2
    0
    0
    0
    0
    0
    0
    Mycobacterium_KMS
    0
    0
    1
    1
    0
    0
    0
    0
    0
    0
    Mycobacterium_leprae
    2
    0
    0
    0
    2
    1
    0
    0
    0
    1
    Mycobacterium_MCS
    0
    0
    1
    1
    0
    0
    0
    0
    0
    0
    Mycobacterium_smegmatis_MC2_155
    3
    0
    0
    1
    3
    0
    0
    0
    0
    0
    Mycobacterium_tuberculosis_CDC1551
    2
    0
    0
    0
    2
    1
    0
    0
    0
    1
    Mycobacterium_tuberculosis_F11
    2
    0
    0
    0
    2
    1
    0
    0
    0
    1
    Mycobacterium_tuberculosis_H37Ra
    2
    0
    0
    0
    2
    1
    0
    0
    0
    1
    Mycobacterium_tuberculosis_H37Rv
    2
    0
    0
    0
    2
    1
    0
    0
    0
    1
    Mycobacterium_ulcerans_Agy99
    2
    0
    0
    0
    2
    1
    0
    0
    0
    1
    Mycobacterium_vanbaalenii_PYR-1
    1
    0
    0
    1
    1
    0
    0
    0
    0
    0
    Mycoplasma_agalactiae_PG2
    0
    0
    0
    0
    0
    0
    0
    0
    0
    0
    Mycoplasma_capricolum_ATCC_27343
    0
    0
    2
    0
    0
    0
    0
    2
    0
    0
    Mycoplasma_gallisepticum
    0
    0
    0
    0
    0
    0
    0
    0
    0
    0
    Mycoplasma_genitalium
    0
    0
    0
    0
    0
    0
    0
    0
    0
    0
    Mycoplasma_hyopneumoniae_232
    0
    0
    0
    0
    0
    0
    0
    0
    0
    0
    Mycoplasma_hyopneumoniae_7448
    0
    0
    0
    0
    0
    0
    0
    0
    0
    0
    Mycoplasma_hyopneumoniae_J
    0
    0
    0
    0
    0
    0
    0
    0
    0
    0
    Mycoplasma_mobile_163K
    0
    0
    0
    0
    0
    0
    0
    0
    0
    0
    Mycoplasma_mycoides
    0
    0
    0
    0
    0
    0
    0
    0
    0
    0
    Mycoplasma_penetrans
    0
    0
    0
    0
    0
    0
    0
    0
    0
    0
    Mycoplasma_pulmonis
    0
    0
    0
    0
    0
    0
    0
    0
    0
    0
    Mycoplasma_synoviae_53
    0
    0
    0
    0
    0
    0
    0
    0
    0
    0
    Nocardia_farcinica_IFM10152
    3
    0
    1
    0
    3
    0
    0
    0
    0
    0
    Nocardioides_JS614
    1
    0
    0
    0
    0
    1
    0
    0
    0
    0
    Oceanobacillus_iheyensis
    3
    1
    4
    3
    1
    3
    1
    4
    3
    1
    Oenococcus_oeni_PSU-1
    2
    1
    1
    1
    2
    0
    0
    0
    0
    0
    Pediococcus_pentosaceus_ATCC_25745
    4
    3
    3
    3
    4
    3
    2
    2
    2
    3
    Pelotomaculum_thermopropionicum_SI
    2
    0
    0
    1
    2
    0
    0
    0
    0
    0
    Propionibacterium_acnes_KPA171202
    2
    0
    0
    1
    2
    2
    0
    0
    0
    2
    Renibacterium_salmoninarum_ATCC_33209
    12
    1
    10
    2
    3
    1
    0
    1
    0
    0
    Rhodococcus_jostii_RHA1
    4
    1
    1
    2
    4
    0
    0
    1
    0
    0
    Rubrobacter_xylanophilus_DSM_9941
    19
    1
    11
    12
    17
    12
    1
    9
    10
    12
    Saccharopolyspora_erythraea_NRRL_2338
    9
    0
    3
    2
    6
    1
    0
    1
    0
    0
    Salinispora_tropica_CNB-440
    19
    2
    20
    15
    18
    14
    2
    14
    11
    13
    Solibacter_usitatus_Ellin6076
    6
    0
    1
    1
    4
    3
    0
    1
    1
    2
    Staphylococcus_aureus_aureus_MRSA252
    15
    11
    15
    12
    14
    11
    7
    11
    9
    10
    Staphylococcus_aureus_aureus_MSSA476
    19
    13
    19
    15
    18
    14
    9
    14
    11
    13
    Staphylococcus_aureus_JH1
    20
    15
    20
    15
    19
    16
    11
    16
    12
    15
    Staphylococcus_aureus_Mu50
    20
    15
    20
    15
    19
    15
    11
    15
    12
    14
    Staphylococcus_aureus_MW2
    21
    14
    21
    16
    20
    15
    9
    15
    12
    14
    Staphylococcus_aureus_NCTC_8325
    17
    12
    17
    13
    16
    12
    7
    12
    9
    11
    Staphylococcus_aureus_Newman
    19
    14
    19
    15
    18
    13
    8
    13
    10
    12
    Staphylococcus_aureus_RF122
    12
    8
    12
    9
    11
    9
    6
    9
    8
    8
    Staphylococcus_aureus_subsp._aureus_COL
    20
    15
    20
    16
    19
    16
    11
    16
    13
    15
    Staphylococcus_aureus_subsp._aureus_JH9
    20
    15
    20
    15
    19
    16
    11
    16
    12
    15
    Staphylococcus_aureus_subsp._aureus_Mu3
    21
    16
    21
    16
    20
    15
    11
    15
    12
    14
    Staphylococcus_aureus_subsp._aureus_N315
    19
    14
    19
    14
    18
    16
    11
    16
    12
    15
    Staphylococcus_aureus_USA300
    19
    14
    19
    15
    18
    14
    10
    14
    11
    13
    Staphylococcus_epidermidis_ATCC_12228
    10
    6
    10
    7
    10
    6
    2
    6
    4
    6
    Staphylococcus_epidermidis_RP62A
    10
    7
    10
    9
    10
    7
    4
    7
    6
    7
    Staphylococcus_haemolyticus
    14
    7
    14
    12
    14
    11
    5
    11
    9
    11
    Staphylococcus_saprophyticus
    2
    1
    2
    2
    2
    0
    0
    0
    0
    0
    Streptococcus_agalactiae_2603
    20
    13
    26
    20
    20
    13
    7
    18
    12
    13
    Streptococcus_agalactiae_A909
    18
    11
    23
    19
    18
    12
    5
    16
    12
    12
    Streptococcus_agalactiae_NEM316
    30
    22
    36
    30
    30
    26
    18
    31
    25
    26
    Streptococcus_gordonii_str._Challis_substr._CH1
    26
    17
    25
    21
    25
    23
    15
    23
    19
    23
    Streptococcus_mutans
    6
    5
    6
    5
    6
    5
    4
    5
    5
    5
    Streptococcus_pneumoniae_D39
    15
    11
    14
    12
    15
    9
    6
    9
    6
    9
    Streptococcus_pneumoniae_R6
    15
    11
    14
    12
    15
    9
    7
    9
    7
    9
    Streptococcus_pneumoniae_TIGR4
    13
    11
    15
    10
    13
    7
    7
    10
    5
    7
    Streptococcus_pyogenes_M1_GAS
    14
    9
    15
    14
    14
    12
    7
    13
    12
    12
    Streptococcus_pyogenes_Manfredo
    13
    6
    14
    12
    13
    12
    5
    12
    11
    12
    Streptococcus_pyogenes_MGAS10270
    21
    18
    23
    18
    21
    18
    15
    20
    15
    18
    Streptococcus_pyogenes_MGAS10394
    16
    8
    16
    13
    16
    11
    6
    11
    10
    11
    Streptococcus_pyogenes_MGAS10750
    19
    12
    22
    16
    19
    13
    9
    16
    10
    13
    Streptococcus_pyogenes_MGAS2096
    16
    9
    17
    15
    16
    9
    4
    10
    9
    9
    Streptococcus_pyogenes_MGAS315
    14
    7
    15
    13
    14
    8
    5
    8
    7
    8
    Streptococcus_pyogenes_MGAS5005
    14
    9
    15
    14
    14
    10
    5
    11
    10
    10
    Streptococcus_pyogenes_MGAS6180
    24
    17
    24
    22
    24
    17
    12
    17
    15
    17
    Streptococcus_pyogenes_MGAS8232
    13
    5
    14
    12
    13
    12
    4
    12
    11
    12
    Streptococcus_pyogenes_MGAS9429
    17
    10
    17
    16
    17
    12
    7
    12
    12
    12
    Streptococcus_pyogenes_SSI-1
    14
    7
    15
    13
    14
    9
    4
    9
    9
    9
    Streptococcus_sanguinis_SK36
    33
    30
    33
    33
    33
    29
    27
    29
    28
    29
    Streptococcus_suis_05ZYH33
    26
    22
    27
    21
    26
    12
    10
    12
    11
    12
    Streptococcus_suis_98HAH33
    25
    20
    25
    20
    25
    8
    6
    8
    7
    8
    Streptococcus_thermophilus_CNRZ1066
    1
    2
    2
    1
    1
    0
    0
    0
    0
    0
    Streptococcus_thermophilus_LMD-9
    6
    5
    7
    3
    6
    2
    2
    2
    0
    2
    Streptococcus_thermophilus_LMG_18311
    2
    2
    4
    2
    2
    0
    0
    1
    0
    0
    Streptomyces_avermitilis
    16
    2
    20
    6
    3
    11
    1
    13
    0
    1
    Streptomyces_coelicolor
    15
    1
    18
    4
    1
    13
    1
    14
    1
    0
    Symbiobacterium_thermophilum_IAM14863
    0
    0
    0
    2
    0
    0
    0
    0
    0
    0
    Syntrophomonas_wolfei_Goettingen
    0
    0
    0
    0
    0
    0
    0
    0
    0
    0
    Thermoanaerobacter_tengcongensis
    0
    0
    0
    0
    0
    0
    0
    0
    0
    0
    Thermobifida_fusca_YX
    7
    1
    7
    7
    6
    7
    1
    7
    6
    6
    Tropheryma_whipplei_TW08_27
    0
    0
    1
    0
    0
    0
    0
    1
    0
    0
    Tropheryma_whipplei_Twist
    0
    0
    1
    0
    0
    0
    0
    0
    0
    0
    Ureaplasma_urealyticum
    0
    0
    0
    0
    0
    0
    0
    0
    0
    0


    View predicted proteins by sortase family type (only for CW-PRED2 algorithm results):