Organism: Clostridium_difficile_630
Prediction method: von Heijne consensus pattern
Number of proteins predicted : 59

>gi|126697872|ref|YP_001086769.1| D-ribose ABC transporter, substrate-binding protein [Clostridium difficile 630]  [20-22]
MRVRKILSLGIAGILAIGMLTGCSMEGPSKSDNKGGSDKKDLTIGVSTITLQHQFFIDID
EGIKEKAKELGVKVIVNDPDQDVAKQTSAIEDFIQQNVDGMIVLGTDNSAIVPAVEGAFE
KMPVVTVDAVLNTENITSYVGTVSYDAGKKLGEYTKKYIDEKLGGKSEIAIVTDLKSQIQ
MQRIDGFKDALKGSANVKILNSQPGYDREESLNTVENLIQSNPDVDIIYATAENSVLGAK
AALESAKNKDVKIVGFDLTEEASSGITDGTILAMIQQQPKEMGRLAVEAVVKAIKGEKVE
KNIPVPALLYDKENIKDFKN
>gi|126698107|ref|YP_001087004.1| putative amidohydrolase [Clostridium difficile 630]  [63-65]
MNKEQLKSLVIKTIDENREKILKIGQGIYKNPEYGYKEFKTTEAVSNFFEQELNLSVEKN
IAVTGCKADANSSKKGPHISILGELDGISCKEHKDANEIGASHTCGHNIQIAGMLGAAVG
LVKSGVLEHLDGKVSFMATPAEEFIELEYREQLKKEGKITYFGGKQELIKRGYFDDIDIS
MMFHASDLGEDKALVGPESNGFVGKKVKFIGKESHAGSAPHDGINALNAAMLAINNVNAL
RETFKESERVRFHPIITKGGDIVNVVPADVHMESYVRARTINGMIDANERINKALMAGGM
AVGADVEITEIPGYLPILRYKSLDNLFKNNLEDLGLKGKVIDGGDFTGSFDFGDVSHIMP
TLHPMIGGVKGALHTRDFEIVDEDLAYIIPAKAMALTVVDLLFDNAKDAKDILDTFTPVM
TKKEYLTFLEKHDKTL
>gi|126698167|ref|YP_001087064.1| hypothetical protein CD0589 [Clostridium difficile 630]  [49-51]
MPENNNQLLEEITLLLNEGKVAINKAENQNLILILGGTGCGKSTAINYLAGCVMMEVEDE
DTGISYIDCLDPVAEIGSGAVSQTLYPNIVNMRKPIEGMDAKLCDTAGFSDNRGVAHDIS
AAVSLGEVFKNSASICAVIVLIPEADILDSRLTKVLDLFQQLNMCLHKENFKGSITFFIS
KSFLGRTEKQIYNVIKRKYEQLCENLDSNIEEKAWLFEELLKDNGKNIHLCKPLASDERE
GLLKQVLELDEVKDKTSAFQYPISADARLVLDTLIKEIQNNIVSSLEDYVKAYTEDFINI
IGSITMIQEITKYDEVVKVFKNWLESTTSLTIERFINVLAKQSGLFLQDSCMKLQNKIKG
NLDIIDALSKYTEHGTGEILLPSVHMEFIIEKASKKIMEQNFIIIRKNLEKVLVSYEVQK
QVFTLPNREKLMEVANKKDYVYSVSDFNSILTNVTVTQNEELEDSITRLSAYGEEGNEII
REFIGKYILNPFIVKTININDKKGIEIRALIPNLVISSVLEYFKNRKVDDNVSTFMFFAK
DTIYMDDNLGMNFASEKNIILASNNLDVGSNVKINVSGKSGELVDNSMYGKNGEDGRDAG
NIYLYIKEEIRNYRLTLIANGGNGSKGIDGENGETGASGSNGADAGYTSYFHGQMFKGYF
EKGTSGKKGEKGGAGGNAGRGGNAGKKGNIYFISDSEEQKNRIINHCDITVKDGEAGPNG
RPGLGGYGGSGGYHGYNTLSFSPSGIDKTVYYTGYFTSWDYKLDSIIKYHIEFSGGSWNE
GKTGPAREYAEYGDRGDNGGFNAPNTKLSTAVSKVEENLIKEKYQGYCSEI
>gi|126698289|ref|YP_001087186.1| hypothetical protein CD0710 [Clostridium difficile 630]  [4-6]
MILVSACLIGINCKYSGDNNDNEKVKEYLKGKEFTLVCPEQLGGLSTPRPPAEIVDGKVI
TKDNKDVTENFVRGANETLKIANLYVCSEAILKEGSPSCGCSLIYDGSFSGKKIPGKGIT
ARLLEEEGIKVKSEKDL
>gi|126698327|ref|YP_001087224.1| putative lipoprotein [Clostridium difficile 630]  [19-21]
MNRCKFAKLIITSMIVLLLTGCSLKKEDNYKLDPENPTSIQIWHYYNGQQKMAFDKLVKE
FNDTVGAEKGIIVEAFSQGNVVDLSEKVLDSANKKVGSEDVPNIFAAYSDTAYEMDKLGL
LVDMDKYISKEELNEYIDEYVEEGRINSKDEFKLFPIAKSTEILMLNKTDWDKFAKATNS
NINDIKTIEGLVETSKKYYEWTDSLTKEPNDGKAFFGRDALANYIIIGSKQLGVEIFSVK
DGKVTLNIDEKVMKKLWDNFYVPYINGYFASYGKFRSDDAKTGDILALVGSSSGAAYFPD
RVMLNDNESYNIETSVFQAPRFKGEGKYAVQQGAGMAVTKSTKEEEYASVEFLKWFTDKE
PNIKFSIASGYLPVKKKTNDLDVIKEVMKKDNLSLSDKVEGSIASSIEQINSCNLYTNKA
FDGGTKARQILEYSMLDKAKEDSNKINELVKSGTSKKDAVAQFNNDKNFKTWFEIFKAEL
ENAIKK
>gi|126698345|ref|YP_001087242.1| PTS system, glucitol/sorbitol-specific IIb component [Clostridium difficile 630]  [48-50]
MAFNKVKIVKGSGGWGGPLIIEPTEKKNKVVYVTGGAKPETAVKIAELTGCELIDGFSQG
VKDDEIACVIINCGGTLRCGIYPQKKIPTINIMKTGKSGPLAMFIKEDIYVSGVKPTNVE
QL
>gi|126698395|ref|YP_001087292.1| probable transporter [Clostridium difficile 630]  [33-35]
MKKISNQKLLLLSIVTFFWFSQYVYIPFQNPYLSACNVSTNMIGIIIGAYGISQCLLRLP
VGVFADSINKHKIFILSGIFFAGLASLIRVFSPGGNGFLIANILSGISSSTWISYMVHYT
NFFSTEHQQKATSTIILVNNLGMLIGFVMSTLFYEKLGMTALCIMSVLSSVIGTILALNI
KNHNSKKIPKKISIKKYLSICKDKRLVFFSFMALIQQGIQMSTTMSFTTQILKNLGSSST
LIGLSSIFYMVCAVASSGFASTKFCTKYGPKFWIPLVFILVSAYCFLVPTIKNINIIFVL
QVLPGISTGILLSYLTSESMKNVPKHQKSTAMGFFQAIYAIGMSVFPMIVGKISEYTSIQ
YGYFILAIIAILASILSYTYYKKVDLTLNYDIIQS
>gi|126698403|ref|YP_001087300.1| putative lantibiotic ABC transporter, permease protein [Clostridium difficile 630]  [23-25]
MLDIISCEFSKLKRLKFILISILGACLFPIPATILIAKDNLPFEQLFKLVVNFGYFLLLP
IVLSIVASQLFFIERDNDVLKNLATVPVQKGKLALAKLAVLLFISLFYSVAGLGATIIGG
FIVGIVEGVAVKLGMSIAFGIMFFVTVLPVVVLIVYFNRSYIFSIILSFVYAIFNFSISL
NIINFEPNNPILSVLPAPVIMRWWMAFWGDPTGEYTALRQPYLLSTPACVGILCLITIIA
VLLICMIYKKQEN
>gi|126698450|ref|YP_001087347.1| ABC transporter, substrate-binding lipoprotein [Clostridium difficile 630]  [21-23]
MINKKRLASLILAGALSISMLTGCSQGGDSGNSKQESNSKDKEVKKIGITQLVEHPALDA
TRTGFVKALEKNGFKDGENIDIDFQNAQNDMPTTQSIASKFASDKKDLIFAISTPSAQAA
FNATKDIPILITAVSDPVAAGLVKTLEKPGTNVSGTSDFVSVDKGLELLKIFAPKAKTIG
VMYNTSEVNSKVQVDALKEYASKNGFKVVEKGITTSNEVNQGISSLVGKIDVLYVPTDNL
VASSMPIVSKIATENKIPVIAAESGPVEKGALACQGINYEKLGYKTGEMAVKILNGESVS
DMPVATSDDTDIIVNEDILKALGMEKPSNENISYVKTKQE
>gi|126698453|ref|YP_001087350.1| ABC transporter, substrate-binding lipoprotein [Clostridium difficile 630]  [21-23]
MIKSKKILSLIIAGVLGVSMLTGCSQNDGSNASNENKETDSKKQKNIGITQLVEHPSLDK
AKKGFIKALEDKGYKDGDNIKIDFQNAQNDMPTTQSIASKFVSDKKDLIYAISTPSAQAA
YNATKDIPIIMTAVTDPVEAGLVKSLEKPGGNVSGTSDYLSIDKTLELVKTLTPKAKKIG
VIYNTSEVNSKIQVDSLHDYAKKNNYEVVEKGISSSSEVNQAISSLVGKIDVLYVPTDNL
IVSSMPIVSKVANENKIPIIASEEGSVSSGALACCGIDYEKLGYKAGELAIEVLEGKSVG
DIPVTTLDETEIIINEDTLKALDMQKLSADNIKYIKSDENAKSAK
>gi|126698509|ref|YP_001087406.1| hypothetical protein CD0931 [Clostridium difficile 630]  [58-60]
MFSIYKVKLKTKRTLEQVRNQSADFEYSEEGLKNTLRYYNLIDGLEVIVVKFKDEYSLAG
CDEKDVEKIRDAYYILEQDEYFGCYINEYERFKKDWENGECGGEIGMMFSDDEVEIIEKL
REG
>gi|126698569|ref|YP_001087466.1| putative drug/sodium antiporter [Clostridium difficile 630]  [65-67]
MENSNTNLGSESVGKLLFKLATPAIIAQIVNVLYNIVDRIFIGRMENGEVAMAGVGVAFP
IIIIITACSYLIGMGGGPLAAIKMGEQNNDEAEKIMSNSFSVLVILAILLTIGFKIGKEP
LLWMFGASESTIGYSMDYLNIYLIGTVFVQISMGMNTFINTQGFATTGMMTVAIGALINI
ILDPIFIFGFNMGVKGAALATIIAQGVSAIWVLMFLFGKKSILKIKKKYMIPKASIILPV
LGLGISPFIMQSTESLVLIALNSKLQMYGGDLAVGSMAIMSSIMQILMLPNMGVTQGAQP
IISYNYGSGQLDRVKKTFKLCLLSCFTYSTILWLLLMIFPAFFVSIFNKNPQLLSMTSWS
IKIYFAGAFMFGIQIACQQTFLALGKATISLVLALLRKIVLLIPLIFILPTFFNEKLFAV
ILAEPVADITAATITAISFFIFYKCFLSKPKAIKE
>gi|126698725|ref|YP_001087622.1| putative solute-binding lipoprotein [Clostridium difficile 630]  [17-19]
MKRIKVLTVVLAITFMVAGCSNTKTKQSSSDSSLQSQSSIDAKYINLTMVTPKTINPITN
TDKSVGYIMNLVYDSLFTIDENYNVIPQLVKEYNIAQDGMSIDIKLKDAKWHDGKNVTSN
DVNYTIGLIQKSADSPYNEFTKNIASVNIKSDKDFTIKFKARYAFSIDSLIFPIVSQNHL
DSKDVNDKNNNMIGNGKYKIESYTEREGMVLSVNKDYYEEVPKTMKNIKVGMVPNEDART
SMVMALDSDITNVTLNDLSKFQEKEFNITKYQGRDYECVLFNYNNPFFKDVNFRKAIAHS
IDKDRIISEGYMDDATPVNFPLNSKSKYYNSEMKDLEFNKDKAIECLAKVEYANVNSVNQ
NDNKVKNQKKSAKKNSKKLTPEEEAKAKKAEEDRIKKEAEEKKNREKEEVKKSLSEMNLK
IIVNRDNSERIKTANIINENLKAIGINSTVNQLSDKDMENALNSKNYDLALVGWKLSIIP
DASSIIASSGYTDDKLNGYMSALTSSTSEIETKKAYKDVQTYIKDNATFISLAVRNNYIV
SNSRLKGKITPNDFDVYEGISNLDIKSNESN
>gi|126698783|ref|YP_001087680.1| hypothetical protein CD1187 [Clostridium difficile 630]  [29-31]
MMKYKTTGTCATEIEFEVKENKVTNVNFIGGCDGNLKGLKVLVEGMNIEDVIQKLKGIEC
KTKPTSCPDQLSLALENYMNIK
>gi|126698990|ref|YP_001087887.1| putative allophanate hydrolase subunit 2 [Clostridium difficile 630]  [27-29]
MGFKVELGGFQTLIQDRGRVGYGQYGVSGCGAMDEYAHRVGNILVGNSEDEASLEVLMLG
PTITFDEYTQIAVTGGDLGAKINGKEIQNWRSYQINPGDVLSFRGVKSGARAYVSIAGGI
DVPLAMGSKSTYTRAKIGGFEGRALKKGDYINTFIQEKDFTINKKLSSKYIPTYSSEIVL
RIVKGPQFDAFSNGEVEKFLSNKYKVTNEIDRMGCRLDGESIKHLNGADIISDGISYGAI
QVPGHGKPIIMLSDRQTSGGYTKIGNVISVDLYKLAQAKPNDVVKFELVDIYEAHRLLRE
QEDKIQDIYKSMKNIRVVKAKVLNDIAV
>gi|126699090|ref|YP_001087987.1| putative lipoprotein [Clostridium difficile 630]  [19-21]
MKLKRTLFVGLALVLAIGITACTKNNEKPSENTGKNPNESVNNNEGYMNYYSTSYNDYIA
GLNRYSIYDTPESINNQFKDKEYPGNEKYLSDVKAAYKDSRDKIQSFVTSLKKDGKTEDT
ELKKMNDDLIAEGERLVKDIDKRIEKLDKVSDEDMKKGQNDFIKLVHGTEDVGNDIGSGF
RKMIKDMNDRLGITGNNKK
>gi|126699110|ref|YP_001088007.1| putative thioredoxin [Clostridium difficile 630]  [18-20]
MKRFFIVVLGCICVLGMISGCSKKESKPVEKNKNNSEWFSNLDTEDVDGNKVTKEIFSNK
ELTLINVWTTWCGPCVGEMPELEALSKEYESNNSNVAIKGLVVEVDKTDMRTGLSNEEKN
LVKDIMKKSDATYQQLTVSEELKKTDFKRVMEFPTTYFVDKKGNFVGEKVVGANSKEDWK
KIIDERLKMVKANE
>gi|126699112|ref|YP_001088009.1| putative iron-sulfur cluster-binding protein [Clostridium difficile 630]  [57-59]
MKLLSKVNNNIRLITQVAFTALTNGYVNGFLEGTIYGGESKKLCVPGLNCYSCPGALGAC
PIGSLQAVLSSREYKFSFYVVGFLMAFGAFFGRFVCGWLCPFGLVQDLLHKVPFPVKIKK
VYGDKYLKYLKYIVLIMFVIILPVAIVNVAGGGNPWFCKWICPSGTLLGGIPLILGNENL
RESIGFLFSWKLSILLLILLMSIITYRPFCKYICPLGAIHGFFNPISIYRFKIDKDKCTN
CTACQTKCKLDIPIYKDVNSPDCIRCGECIKVCPQNAITTTFSKDKKENNICAKKYRGI
>gi|126699113|ref|YP_001088010.1| putative lipoprotein [Clostridium difficile 630]  [18-20]
MKKFIICIIMFAISVLVLAGCTNDNKIKNEVDSMFNSIKTQDADTVDKYFPKSGLGNLIY
EDKEGFKMYSKNMTWEISDIKNNKDKVTVDLKINNTDMVSILKKNPPKLGEMMPNPTMKD
IDSAKKKEFNITLELVKSGDNYVCKVNQESAMKLLNVITGGGIDYLADYNKDYYKQLDEE
QKNYENKNS
>gi|126699141|ref|YP_001088038.1| putative glutamate synthase [NADPH] small chain [Clostridium difficile 630]  [50-52]
MDAKKVKVPVREQEPAVRATNFDEVCLGYNKEEAMAEANRCLACKKPKCVGGCPVGIDIP
GFITKIKEDDIEGAAKVIAKSSSLPAVCGRVCPQESQCEGVCILGIKSDAVSIGKLERFV
ADWSKENDINLSDTEPKKNQKVAVIGSGPAGLACAGDLAKKGYDVTIFEAMHEPGGVLTY
GIPEFRLPKQAVVQPEIDNIRKLGVKIETNVIVGKTITVDELIEDEGFEAIFIGSGAGLP
MFMNIPGENANGVFSANEFLTRVNLMKAYRDDYDTPISSGKKVAVVGGGNVAMDAARTAL
RLGSESYIVYRRSEKELPARAEEVHHAKEEGIIFNTLTNPKEILVDENGYVKGMVCIRME
LGEPDDSGRRRPIEIEGSEFVLDVDTVIMSLGTSPNPLISSTTKSLDINKKRCLITDENG
QTSKEGVFAGGDAVTGAATVISAMGAGKTAAASIDEYLKAKVNA
>gi|126699150|ref|YP_001088047.1| putative hemolysin-like membrane protein [Clostridium difficile 630]  [19-21]
MYQFFLKGRDPISSLTHFIGACLSLLATIILVFQSVTLQETSLLMIVSVSVFGLSLIALY
SASSYYHFLKGTPEQELFFRKVDHAMIYVLIAGSYTPICLNFMEKKEGIIFVTAIWIVAF
IGIIIKIFWMDAPRWLSTSIYLLMGWAIVFDINAFNSIPKDCLRLLIMEGVSYSIGAIIY
IIKKPNISPEFGFHEIFHIFIMIGSLFHFLAVLLYVL
>gi|126699226|ref|YP_001088123.1| putative lipoprotein [Clostridium difficile 630]  [18-20]
MCKKTYLLVVSMLIAGLLTACSGSPTKDSGQAQDNTKKEANASNNALKDEKNNENLMEQD
FKVPYTDAINIFKDKYKDADIVDLSLERDLNKFVYTVEGVDDNNEYKMKIDANTKDVLED
KTEKLDSEDLNGVARKEKLDLNDIMTPQQAMEIALKEQNGIVKEWSLDKDLDVTFYKIRI
DKDKNEYDIKVDSKKGTVLKVEKED
>gi|126699293|ref|YP_001088190.1| putative lipoprotein [Clostridium difficile 630]  [25-27]
MLNMNKIVKKSISLMIILTIFIFMLTACEKDEQPDSVDIQTEDKNEIKIDEGNAKVLNIG
KSEIINIDEGDKVDTSTKVENNSTFNISNVELIYNEYDENKKIISSDSKALLDMTLMPGK
VAYIECGHKTFVKGVEVYAYEYEAEGKIVYVNLKENTINIRNNNIKLENSSQYEVLSTSE
LKKVNESNEGITYQVKVKNSSSKDLGNIILKTAEVNENGEYLTVNRVPSYKILKPSEETD
IDILCSTKAKSVEIVGYTYDDIKEKANVDIDLKSHKVKIDK
>gi|126699364|ref|YP_001088261.1| peptide deformylase 1 [Clostridium difficile 630]  [48-50]
MAIRKIRTFDDEILRKKSKYVENVDNKIREILNDMAETMYNTPNGGGLAACQVGVLKRLV
VIDLGEGLIKLVNPEIIKQEGEQIVVEGCLSFPEVWGKLKRPKKVTVQALNEYGEKIEIK
GSGFMAKCLCHEIDHLNGIVFTDKIIEHVKL
>gi|126699375|ref|YP_001088272.1| putative lipoprotein [Clostridium difficile 630]  [17-19]
MKKLVIILISIISMVSLTACKKSNESKYNNLNNKESGQTTIEMDLDKNYDTSDPFVNARL
FCVSNDIDVLDTEISFKMDGDSGIVEIKDNKTDETLWSNTWHGSVDNDTFTISLSNIQKE
KEYAICFTGIKINHAVVKVTFESNLVKEKEKPSK
>gi|126699390|ref|YP_001088287.1| putative lipoprotein [Clostridium difficile 630]  [17-19]
MKVLKLITVVALMMLFVTGCNIKTESPEQLAKIPDYDDTKKVLYDGIDQLLKPDSSMILP
SNTKEVGKINKVDLNSDGIDELVVFEQKEDLSNNVSQVGFVTLSYNGEKYVLGDHFLENG
ESIEYANFYDLDSDGYKEVILLVKSKDKTNMHIYKVVDNEITKIYDLDASWLQNKEDFND
MKVKIGYIDGDDKLDILMLHLNNKTNEMFASVANFDGKMKIKDSVKFENVKNLSELYITL
GNVASSVGNSSAAIKGIVLDIPILKDNNYITQILYMKDGKINKAFSDYDKTITKSYYIPV
DDIDKDKIIEIPIVAGSTGNNKNTYSSKSSATISWYRWNGKEGADSSLIFTSQIYYNYKY
NFKLFIPNNLFDKILVEQEFVGEKAVFKFYYFDYSDRKNLFNIVVESKNKLEDRKNTGTQ
NSIVLQESDEYTFLLVVNNANEMDKLDMTIDALKEYFSLIYG
>gi|126699536|ref|YP_001088433.1| AraC-family transcriptional regulator (partial) [Clostridium difficile 630]  [65-67]
MVFFAKLLRGYENSIEVPNMTKKDNLKNTHILTYIQDNYFDITLEEFANEFHFSIPYCSK
IIKEIAGCNFTQLLQRIRLERAESLLINTNISIADISNNVGYPNVEHFIRLFNKKYNMSP
SKYRKNTSKI
>gi|126699539|ref|YP_001088436.1| hypothetical protein CD1930 [Clostridium difficile 630]  [29-31]
MIEISIKNKKNSKIKTLILLLIVSISIYLTGCTTSDNGNNQSNNNDSLSSSISSDKNVKI
HFIDTGNSDAILIQDGKTFTLIDGGDNDDEGLMVDYLNNQGVKDIKYLIATHSHADHLGG
LDSVVKNFNIENVFVSNGSAETKSYRDFINALANKGLSPSVPLENNKFYLEDSYFEVLNT
NGGDTTNEQSLVLVYTNGNDKVLFTGDAEEGTEKEILPKLEKVDLLKVAHHGSRSSSSQE
FLDKVNPEYAVLLVGKGNSYGHPHQETMNKLKKMGVKVHRSDECSDIIFESTGDGVFTSC
KDGSYNKGVREDGNSGKSNSNTSKNDSFKNKQNTSNSEEIVYFTPKGKSYHSTKNCSGLS
RSKKILSGTIAESKKNDPCDICYGK
>gi|126699588|ref|YP_001088485.1| ABC transporter, substrate-binding protein [Clostridium difficile 630]  [20-22]
MNFKKLGILGLVSVFTLATITGCSSNNNKDKNNDKDTSSKKVTMVLDWTPNTNHTGLFVA
LDKGYYKEEGLDVEIVQPPESGAETLVATGKADFGISYQEQVTYAKTSEDPLPIKAVATV
IQHNTSGFASPKEKNITTAKDFEGKTYGGWGSPSEEAVFKAVMKKNRADFNKLKIVNTGQ
DDFFAAMKTVDFAWIFEGWDAVKADLIGYDLNFIPVKDLDERLDYYTPLIISNETVLKDN
PELAKKFLKATTKGYEYAIKNPEESAKILVKHAPEVDEKLALKSQEYLASKYKDDAPRWG
EMKDSVWNNYTSFLKEYKLIDKDMKASDAYTNEFLPQ
>gi|126699646|ref|YP_001088543.1| putative lipoprotein [Clostridium difficile 630]  [17-19]
MKKIILALTTFLLAISLTACSSAKPEDTIDSFFNSAKKFDFEGMNKVMENNDEKYKDILK
ELDTKDPNAQYVLDYLKQNASKITYTIKDSEVKGDKATIKVECKFIDSTPLLQEIVAEAF
TKMIGMSFSGQDLTDEKTTEMLVSIMKEKQKSVKETYVTKNVEFECSKKDNKWIISSVND
AVADVLLSNLVTAGQEFSNSMNTLE
>gi|126699691|ref|YP_001088588.1| putative FAD-binding subunit of xanthine dehydrogenase dehydrogenase [Clostridium difficile 630]  [29-31]
MVTIKEYSVPQSLEEAYKILISKKNNVILGGCGFIKLSNKNIGTAIDLKDINLNYIKEDE
KNILIGADTSLRSLEIDKTIKNYCSGILSSAVSNIVGVQFRQGARIGASVFSKYGFSDLI
PALLVVGAKVRLYNKGILELSEFLDSELSRDILVEVILPKKDAIAVFDSIRKCTGDFSVL
NSAMLKENDTYKIAIGARPQKARLALEASNILNKEKDIDKASIVASKELTYGSNMRASKE
YRKDMASALVKRMYNAIEEGMYND
>gi|126699697|ref|YP_001088594.1| putative FAD-binding subunit of xanthine dehydrogenase [Clostridium difficile 630]  [29-31]
MITIKEYVVPKSLDEAYELLISRKNNIILGGCGFLKLGSKNIGSAIDLKDLALDYINETD
DSILIGADTSLRTLELNKVIKNYCNGVISNAVSNIVGVQFRSGARVGASVFAKYGFSDLI
PSLLVVDAKVKLYKKGVMNLADFLENELEKDILIEVILPKKDAIGVFDSIRKCTGDFAVL
NGAMLKEGSIYKIAIGARPRRAKIAYKASEILSLENDIEKAGEVSSEELSFGSNIRGSKE
YRKDMAKALVVRMYNSIGGECDGK
>gi|126699790|ref|YP_001088687.1| probable amino-acid ABC transporter,substrate-binding protein [Clostridium difficile 630]  [20-22]
MIKRNIIKCLVAVLSLTFVITGCSKKEEVKNEKVITVASSNSADPYSYVDNGEHKGFEVD
MWKEIGKRSGYKIKMEPTGFSSIFGMLDSGKVDVAANFFGMSKERLEKYDASIPYGSDSV
CIAVKDGNNEINKLEDLKGKVVAVSEGSQGQQVATSVNKDNLFQEKVYGDGTSGLQDLDL
GRVSAWIDAELTIVGDAKKANMKVRVLDKKLSATNIAYFFKKNDDKSKTIKEDVNKAIEE
MLADGTVKKISEKWFGMDVSADIQK
>gi|126699793|ref|YP_001088690.1| probable amino-acid ABC transporter,substrate-binding protein [Clostridium difficile 630]  [18-20]
MKKLKLIIMFALVSALLVTGCSSGNNKNKEEQKVIRVATSGTYYPFAFKDKDKLKGFEVD
FWDEFAKRTNCKVEWVLTDFSGLFGLLEADKADAVSAQLTATPEREKKYAFSDAYNYSGT
NIIVREDDTSIKSIDDLVGKKVGVGTGAVANEILKEKYPNDEIKIVNYSSATLKGNYQDL
EMGRLDAVVAQDVEALIAIKEQKLNLKMIEPPIQFGACSFALQKNEKGEKWTKEINEVIE
EMYKDGTLTKISENWLGKDITKEPINE
>gi|126699929|ref|YP_001088826.1| ABC transporter, substrate-binding protein0 [Clostridium difficile 630]  [18-20]
MFKKLSVLALAMIISLSITACNSKENKANDESNTKVTTADDSKEKETLFVYSGAGLKKPM
DEIAKKFEKENNVKVEYSYAGSAQLIAQIETSHKGDVFIVGSEPIYSKAFEKELVGEHKT
VAHHTPAIVVPKGNPANIQKLEDLNKDGVKLILGDKESNAIGKTTQKILEKNNLKSINDN
VVSTAATVNEMIVQLTSSKADATIATKDSVFGNEDVEVIEIAQDKNIDQLISAGIVNYSD
KKDLANKFINYIESDEAKQIFKKYGFEPVK
>gi|126699958|ref|YP_001088855.1| hypothetical protein CD2340 [Clostridium difficile 630]  [49-51]
MTCGVRFCGGCNPRYERGKALTIIKEHFNGRVDFSIAQENVEYDLLLIIGGCATLCASYQ
QYKVKNECVKMWDFSHIERVINVIESAICET
>gi|126699980|ref|YP_001088877.1| putative sulfonate ABC transporter,solute-binding lipoprotein [Clostridium difficile 630]  [21-23]
MKLSKKIQALILFGVMGTSILTGCSSKPKEKEEAKTGKDDYTITVGYYNCDHMTAGPVAE
SAGIYKDLGLNVKTVGNGKVPEAMAAGKMDAGYIGTKGLVGAIPKGSPITIAANNHTGGS
EYLIVSKDIKEPKDLIGKKIATDMSDFLWTSDYGPETGLPTDPSKYEVVNMDSDKDKYLA
LKTGKIQAFTSCDPWGSVAENDGAGKIIASTQYKEKANGKEYNCCSFSLNKNFIKEHPDL
AKKLVLAHTKAIEYIYTNPAEAAKIFAKYYNVEEEVALRTIYKKTVGEGRTLTWKVTGEE
YKNNLQMYKDLKALDDIPKYEDTIDTSLLDSCGADDFDKFIKEKVNPEFPEGMSYEDWKA
KVL
>gi|126700083|ref|YP_001088980.1| putative poly(A) polymerase [Clostridium difficile 630]  [30-32]
MIFMINIEIPKKVDYIIKELEKNGYEAYIVGGCVRDCLLERVPNDWDITTSARPEVVVEL
FEKTIPTGIQHGTVTVMIEHEPFEVTTYRIDGNYSDGRHPDSIEFTNNIVKDLSRRDFTI
NSIAYNSKTGLVDPFNGYEDIQNKYIRCVGNPVDRFEEDALRMLRAVRFSAQLNFKIAEG
TKQSIHKKADLIKNVSIERIQTEFNKILVSDSSKLNLLKSTGLLKFIIPEICELEDVTQH
NPYHIYDVQKHTLIATEVIEDELYLKLTMLFHDLGKKVTKTTDKNGVDHFYTHSRESVKI
AKKILKRLKYDNYTINKVLILIQYHDYRIEPKRKIIKKLLNKLEDVGLFEDLIKVNWADT
LAKNPKYAKQKILNLIECEKEFKHIINQKECFNLKDLAINGKDLISIGIKPGKDIGYILN
KMLEIVINNPELNEKEILKEKALNIYTF
>gi|126700099|ref|YP_001088996.1| putative lipoprotein [Clostridium difficile 630]  [16-18]
MKKKDILLILGILVVITACYGIINVINSKNAGNIEIYVDNKLYKTVSINAKEEFKIENRG
GYNIVKIHDKGVEIVDASCPDKVCVHTGFINKPSQSIVCIPNRVSIKINTNEKNDNQEDI
ISK
>gi|126700167|ref|YP_001089064.1| putative sugar transporter, substrate-binding lipoprotein [Clostridium difficile 630]  [26-28]
MEGIKVGMLKKLCSLAMVAIMTTTLITGCSSGNGKDSKKDGEKEKLVLWMPPVENNMKEV
WDPILDKFEEKNNCEVDLQIIPWDNYSEKFATAISAGEGPDVGYMYAEMYPQFIESGAVE
DLTNYATKEDKEQSIYIKTSEMMGGMYGMPFQAANPGVLYYNKDILEKLGEKPPKTWEDF
KRICKKATQDTDGDGKIDQWGLAQGWGAKTFGNLNWNWYPYLWQAGGDIFNDDLKSVKFN
DKSGLEAAKFLKELQAYVPEDSLSKDSNEMIESVFGPGKAAFTIMLSSAATSVFDESFPD
LNWGFVTGLEDKKAATFGAVDHLSLMSSAKNKELAYKLIQHMLSVESMTEFHKAIPRAPI
TKGEPYQGDERFKEMVENDKNVYRPLVVGPHGVEIYEYLWKELQTMISGDKTPKQALDDA
AKYSNDLLAQ
>gi|126700259|ref|YP_001089156.1| putative extracellular solute-binding protein [Clostridium difficile 630]  [21-23]
MIKLKKVLSLVMVGILSVSILAGCSKKEDSKGKEGKEKLVVWSAPLTDHDADAWKPIFEK
FEKENNCEIEFQIVPWDNYAEKYATAISAGEGPDIGYMYAEMFPQFIEMGAVEDLTPYLE
KSGTSDNYLYLDDAKMMGGIYGLPIEAANPGVLYYNKDILEKLGEKPPKTWDDFKRICEK
ATKDTDGDGKIDQWGLAQGWGSKVFGSLNWNWYPYLWQAGGDIYNDDLKSVKFNNAEGLK
AANFINDMKKYIPEDALSKDSNEMIESVFGPGKAAFTIMLSSAATSTFDKSFPDLNWGYV
TSLEDKTVGSFASVDDLTLMSACKNKELGFKLLEYMLSKESMEAFHKEIPRAPVAKGEKY
QGDPRFEEMVTRDKHMYRPLTVGPHGVEIYEYLWKQLQMMIAGDITPEQALNESAKYANG
LLAQ
>gi|126700282|ref|YP_001089179.1| putative transcription antiterminator [Clostridium difficile 630]  [25-27]
MIIQQIYNNNVVLVLDENIKKELILTGCGIGFQKKKGQEIDKSKIERTFVIQDESFLDKI
SKLASQVDEKFFEVSTEIIAYAEENLNTKLYEYIYVALTDHIAFAIKRYHENITIKNDLL
HEIKRIHKKEYEIGKWAVDYINKEFDVKFPVDEAGFIAMHIVNSNYKGSSKESLLITKIV
KDILNIIRYYYRVEFKEDDINYDRLLTHLKFFAKRLVKKEKINDTNNEIIDIIKVNYEKD
YDCAYKIKTHVEKNYDYYVSQDELLYLTLHIKRVISVLNL
>gi|126700315|ref|YP_001089212.1| putative lipoprotein [Clostridium difficile 630]  [18-20]
MLRKITAFMLSICLIIGLTGCSLLVGKKDKEKIIDDFKVAVVTQPLSENKVQYNMVEEMA
KEYEEENKIDKDKDGQTKVKQTIKHVVLPENFTSNIDSAINKIVKLADDKEVQAIVVSTD
QAGLLPALQKVKEKRPEIITISAPMGDDKNQLSQFVDVNLGVSAEERGKVLAERSKEMGA
KAFIHYASTDDLKDVNIAKRLEMIKETCKNIGLPFVQVNTPNINTEEDKNKVKQFLNEDI
EKQVKKYGKDINVFGVNEYMDEVILTKALELKYIVAEQSNPSPIQTYPSVMGLKISEKDA
QNYDKINDMISEKAKAFGMSNRLGGYPMPMDAFLPSLAIYLATEMVKQDLTQEDVCDPDY
LEAFTELRFGIGSEFTPLTEVLYNYQSVILSQLIY
>gi|126700343|ref|YP_001089240.1| hypothetical protein CD2728 [Clostridium difficile 630]  [66-68]
MTDMSMILHFLFSGVATAGFAVFFNAPLYLLLPAGVTGGIGWIVYVYLFNFTTNAVFAGF
IAAALVSACSETLARKLKQPAIVFVIPGILPLIPGIGLYNTMLSLIQKNYSLAMSKGTDA
LFLSAAIALGVLVVTSFVRTLNLLKIRKNFIPYRKSK
>gi|126700450|ref|YP_001089347.1| serine hydroxymethyltransferase [Clostridium difficile 630]  [43-45]
MLKTTKISDPELYKIVADELVRQEHNIEMIASESTAPTEVLELSGCVFTNKTEEGYPGAR
FQAGSEEADKLETLAIKRAKEVFGAEHVNVQPYSGSTANYCVYSSILKPNDTVLSMRLDQ
GGHLTHGSAVNFLHDIYKYEFYGVDPNTGRIDYDALEAKAKECRPKLIIAGASSYPRLID
YERISKVAKEVGAYFMVDMAHVAGLVAAKVIPSPVPYADFVSSSTTKTFCGPRSGIVLCK
AEHAKKLDKGVFPGTLGSIHLNTVAAKAFSLLYLSTDKFKKIMEQVVVNAQTLASELISH
GFSIVSGGTDNHIVMVDLRSKNLTGKQFEKALEYVGITVNKNVIPDDPQSPFVTSGVRIG
LTSISQRGLKEKEVIQIAGIMNKVAENIDNKEVLDECKAEAQELISKFPLYPEGYFED
>gi|126700474|ref|YP_001089371.1| putative transporter [Clostridium difficile 630]  [60-62]
MRELLKVTLIVMLVLINAFFVACEFAMVKLRSSRIDTMITEGNNNAKRCKIIKDNLNSYL
SACQLGITLCSLALGWMGESTVKELILPIVSVFNLSESIIYTISISISFLIITMMEVVIG
ELVPKALALYNTEKIMLSTSFLLVGFYKLTYPIIYFFNLSTDLFLKPFGYSQADEVDEPH
TGDEIRLLVEESYKSGLIDESEQRLVDNIFEFEEKKIREIMVPRTDMVCIYESDSEEKIL
AILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINENKIELEEILRDIIYISENLTIDK
ALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIVGEIQDEFDKEETHIKKIGAGSYLV
DGTESINYINKYFGLDIEHDGFDSIGGWISYMLGSNIKVNQSVTFENYNFTILELDKLRV
VKLIIKSVI
>gi|126700484|ref|YP_001089381.1| putative oxidoreductase [Clostridium difficile 630]  [43-45]
MKYMNQEYVKGNPIFTNINKVPRQFPYLTDDIDTDVIIVGGGVTGCICAYYLAKNNIKSV
ILEKGRIAHGSTSVTTSLLQYELDDNLIDLTEVMTLKDALKAYNLCTSALEELDTFIELY
GNKCDYAKRDTLLYTANKLEVKAIKEEYNLRKENGFDVEYIDESTNPFSFDLKSGLIAKN
GGRELDPYKYSHHLIDVSLKNGLQVYENTEVKKVDLSNDKVTAEVSYGHKVHGKKLIVAT
GYNTSLFTKRNFATKSNTFNIATKPLKNIASWKNNILIRDNCDPYNYLRTTKDNRLIIGG
EDVSFDDIENETLANEKYDILEQRLKSMFKDIKDIEVEYKYCGCFASTLDNLGFIGPDNK
NNNLWYCLGYGANGILFAILGGIMLSELYLGKQNKNMKLFKVDRFDK
>gi|126700494|ref|YP_001089391.1| putative ferrichrome ABC transporter,substrate-binding protein [Clostridium difficile 630]  [20-22]
MKKIKSLAIFISIITTLVLVTACSDKNTEDKDKSETRVVQSVKGEVKIPSNPKKIVDISG
SSEELLLAGYKPVATANVDSYETDKLPSYIREELKGVKIVGHSMMDTMDMEAILEVNPDL
IIMSQRQEKIYDQLKEIAPVVMMKDYANDWRSKLTDVSKLFDKEEEAKSWLQKYDEKATK
LGKEVIEKNGEKTYLPVLASSGQFMVFSDGGIGTLINDDMKLARPKNMPKQDGITLPMVS
MEGLTDIDADHIVVIATEADKKDLENSAIWAQIRAVKDGNVTILDAAPFFSQSYNPIGKE
LLLESVKNELTK
>gi|126700610|ref|YP_001089507.1| ABC transporter, substrate-binding protein [Clostridium difficile 630]  [20-22]
MKLKKLLIGITILTLATASLAGCAKKNNGEKLSEINLTYVKSPLNVPSIIQKQDDLFGKE
FKKDNIKVNFHEITTGPEQTQALAAGEIDFLHALGGTSALIAASNGVELKILNTYSRSPK
GFMILTNNNSIKSAADLVGKKVAGPKGTILHQVLISALDKEGLSMDDVEFVNMGIPEASA
ALSDGSVDAALIAGPAALKAMKSGSKLVANGEGLVDGIIVTAVSTDFAEKHPEIVERFMK
VEKETLEYVNNNFDEAMEKVAKEVDLSLEETKELYAWYDFSLDITDKDISSLEDTQDFLI
KNKLQEKKVNIKELIYNAK
>gi|126700634|ref|YP_001089531.1| PTS system, IIb component [Clostridium difficile 630]  [8-10]
MKRKIIAVTACATGVAHTYMAAQALKKASKKMGHLIKVETQGATGIDNELTTKDAQIAEV
VIFAVDTKVRNAERFEGKEILEVPVNAPIKDAEKVINDALKLIDTK
>gi|126700690|ref|YP_001089587.1| hypothetical protein CD3073 [Clostridium difficile 630]  [53-55]
MDTKKVTFSSMCIVINIVLGMVISMINIPLLFLDTVGTVLGAVVLGPFWGALIGGCTNLV
LGVISGPTNIPFALVNIVLGLIVGYISKKKGFGYKEAIITGVILSIVCPLIGTPISVLLF
GGLSGSGADLLVGFLVQSGQKIFTAAFFPRILSNIVDKPLSCIMVVYFINKMPKGFIKQY
SKSTSSYS
>gi|126700692|ref|YP_001089589.1| PTS system, IIabc component [Clostridium difficile 630]  [9-11]
MGKKMILGVTGCPTGIAHTFMAEEALKNSARELGCDIKVETNGAIGVENKLTAKDIEMAD
AIIVACDKNVDMDRFNGKPVIEVPVKEGIHKANELIQRCIDGKVAIRKGNLSSSKIAEEG
SLSFGQKLYKDLMNGVSHMLPLVVAGGVLTAISFLWGIYSFDPNSEQYNQIAATLKSVGG
YSMNLMVPVLAAFIAQSISGRAGMLAGLVGGMISFDTGSGFLGGIISGFLAGYLVKLFVH
LLRKLPRQLEGLKSIFIIPIVSVGLVGIAMLLLGGPCSALNNAMMNFLSGLQNSSPIILG
IVIGCMSAFDMGGPVNKAAYVTGTMLLGQGNYLFMAGVSAACITPPLVIAIASTLFKNRF
TEEDRAAGLINYILGSTHITEGAIPFAAKNPLKVLPVLMIASSISSILTYIMKIEVPAPH
GGFLVLGLVNKPLLWVGCIFVGSLVGAVLYMMVTPKVVNAKNTIENTNATKDEHKNESAE
SENVSNNISLYSEETVILDVKGKNKTDVIDEMIGILDKSGVLLDKKKFKEEILKREEISS
TGFGMGIAIPHAKTDAVKVPRVAVGVSKEGFDFESEDGSLAHIIFMIAATDNGDNLHLKT
LSQLSSKLMNEEFLNELLNSKTSREIVSKLNNEEIKSV
>gi|126700782|ref|YP_001089679.1| hypothetical protein CD3163 [Clostridium difficile 630]  [52-54]
MGMIGCYTKISEENVFKLQQAEENLQDFVFEDANENSTINIDKAWHAIHFTLTGCPFGGD
DDNIFSKLVLSGNILMEIDGEFPVMLITANDVKKLSKAMNSLEEQAFRKRFNINEMLENN
IYPVMNDESEDDFFEYVWANLIELKKFIQEASDDGLAVIFFIM
>gi|126700871|ref|YP_001089768.1| hypothetical protein CD3252 [Clostridium difficile 630]  [31-33]
MKVTFNPSGVCCREMIFEVDENNVIVDAEFIGGCNGNLSGLRSLIIGQNALEVADKLNGI
DCGGKGTSCPDQLSKAIRQSI
>gi|126701124|ref|YP_001090021.1| putative foldase lipoprotein (late stage protein export lipoprotein) [Clostridium difficile 630]  [17-19]
MKKVITLVIAMILVVSVTACSSSKGETVATVEGTKISSDEFKKTIALYKDSMEQTYGKDI
WDKEVEKGVKYKDKFKDLILDQLITTEVIYSQAKKDNLLPKKEDVEKSFKELKDAMGKDE
KYKEQLKKLGIDDEFLRDQQEKDLAMQNYQSNFAKKTKISDEEMKKYYDTHKDEFKKDEV
EASHILLKTVDDNNKPLSDKEKAEAKKKAEEALKEVKSGEDFAKVAKKYSQDTSASDGGK
LGFFSRGQMVAEFEDAAFSMKKGEVSDLVETQYGYHIIKVTDRINEQTSFEDAKETIKDQ
LLKNKYQEQIEKLTKEAKVEKDEKVINKITI
>gi|126701149|ref|YP_001090046.1| putative iron ABC transporter, solute-binding protein [Clostridium difficile 630]  [20-22]
MKFRKLVSLGILSTLLLSVITGCNNASSGSNLKSNNKIKGELTVYTAIEEDSIDTYLTTF
KEKYPDIKLNVLRLSVGDITARLLAEKDNPKADVLWGVAATSLIILDDKEMLEPYAPKGF
DKVNPVFKDDKKVPSWVGIDAWMTGITVNTKELSDKNIPVPSSYEDLIKPEYKGLISMPN
PASSGTGYLTVSELIQIMGEEKAWQYMDKLHKNIGVYTQSGSAPAILAASGEYPIGISFG
NRGIKLKGEGYPVEVVFPKEGSGWEIESNALVKKDNIKEASKVFLDWAISKDAMNEYSKN
FAVTTIDTGNPVPEGFPKNPLEQMIDNDLKSAARNREAILNKWIEKYDGKTEKES
>gi|126701152|ref|YP_001090049.1| putative iron ABC transporter, solute-binding lipoprotein [Clostridium difficile 630]  [20-22]
MKFKKLVSLGVLSTLLLSVITGCSTDSSGSDSKSDSKTKGDLTVYTAIEEDSIEPYLATF
KEKYPDIKLNIVRASTGDITARLLAEKDNPQADVVWGVAATSLLVADDQGMLEPYAPKGS
EEIESAFKDDKEVPSWVGIDAWMTGITVNTKELSDKNIPVPSSYEDLIKPEYKGLISMPN
PSSSGTGYLTVSALIQIMGEEKAWQYMDKLHENIGVYTQSGSAPATSAASGEYPIGISFG
YRGIKLKEEGYPVEVVFPKEGSGWDIEANALVKKDNIKEASKVFLDWAISKDAMNEYSKN
YAVTTISTGNPIPEGFPKKPLEQMIDNDLKSAAKNREDILNKWISKYDGKTEKES
>gi|126701157|ref|YP_001090054.1| phosphonate ABC transporter, ATP-binding protein [Clostridium difficile 630]  [24-26]
MKETILEVNNFSKDFELHALNKTITACSNISFEVSKGEFLGIIGKSGAGKSTILKSIYKT
YIPTTGEIIFNSEIYGNVDLAKIGDREMINLRKKEIGYVSQFLKTLPRITAIELVVHSLI
ESGFEKDCSYDMAKDILNQFEIKENLWDAYPNNFSGGEKLRLNLAQAMVKKPRLLLLDEP
TASLDNQSKIYVKEKMLELKSQGTTMIGIFHDIEFMETVIDKTFTMAKGTISESGVA
>gi|126701183|ref|YP_001090080.1| putative peptidase [Clostridium difficile 630]  [22-24]
MYNNILDIEGLKVGQVEDRNGLTGCTVVICEEGATCGVDVRGSAPGTRETDLLDPVNMVQ
KVHAVVLAGGSAYGLESTCGVSRYLEEKGIGFDVGVGKVPIVVGAVLFDLGVGSFKCRPD
LKMGYRACEVANTDILNQGNYGAGCGATVGKIRGQEYAMKGGIGSYSIKLDNGLIVSALI
AVNALGDVYENGKVIAGALNDKKTETIDTYKLMKQGESKGGFSVDNTTIGIIATNAKLTK
AGCKKISQMGHDGYAKSIFPIHTPHDGDTIFTISTGEIEADITLVGSLAVEVVEKSIINA
VKKADSVENIMAYKDIVKKREI

Letters in green indicate the fragment of the protein where the prediction was succesful.