Organism: Tropheryma_whipplei_Twist
Prediction method: von Heijne consensus pattern
Number of proteins predicted : 15

>gi|28493016|ref|NP_787177.1| putative sporulation protein Soj [Tropheryma whipplei str. Twist]  [27-29]
MTKKSARTVAVCNQKGGVGKTTTTINLAACLAERGMRVLTVDLDPQGALTAGFGISNFEY
TVYDLLLGRNRNAVLIQTSLKGVDVLPANIDLSAAEVYLVSEVAREQILAKELESFSSDY
DVILIDCQPSLGLLTINALTASHGLLIPLECEYFAMRGLALLLETVRKIQDRLNTALKVD
GIIATMFDMRTLHAREVLESVKKAFPGLLLTTVINRTIKFPDSSIAGMPVTVFAPNHQAS
KNYRDLTHELVHRGVFTLPS
>gi|28493023|ref|NP_787184.1| iron (III) dicitrate ABC transporter substrate-binding protein [Tropheryma whipplei str. Twist]  [16-18]
MFGRKLLGALVALSLLTGCFGGKGDSESSSVLSKVETVFGEVTIPRPKGHDLRVVALGWS
DAEAALAVGIKPVAVYDWISFGNKGVGPWAEGLFGDVKPEVISRGTDGLNWEQIHNLKPD
LILNVRSNNDEKTYKRLSQIAPTVYGPPGTKSWVLNWRDQQRQVAKALGRVKEGEEAIKK
TEKAIKDAQDPLYRGLKGAFVAKFAEYGVYLPGDGRWDLMQELGFTLEPKINELPKAGFY
AKIPTDKLSWVDTDVLIVISIGTDDITKDALLSSLKAAKEGRVIYANKDLANVLSASSAL
SIREAIKRISDKLREIAKKLRNK
>gi|28493024|ref|NP_787185.1| iron ABC transporter substrate-binding protein [Tropheryma whipplei str. Twist]  [16-18]
MFGRKLLGALVALSLLTGCFGGKGDSESSSVLSKVETVFGEVTIPRPKGHDLRVVALGRA
DAEAALAVGIKPVAVLDAFNIGGKGVGPWAEGLFGDVKPTVMSFSTDGLNWEQIKAFKPD
VILDVRSKNDEKTYKRLSQIAPTVYGPKNSKDYQPYQIPWRDQQRQVAKALGRVKEGEEA
IKKTEKAIKDAQDPLYRGLKAALVVQRPSGYGVFAESTRQWDLIRELGFTLEPRVTELFD
GRHAGKDIPSGKLNLIDTDVIVVTVKRGIRKAANHNDPLIASLKASKEGRIIYGSDEFNL
ALIAGSVLSIPEAIKFLSDKLREIAKKLRNK
>gi|28493103|ref|NP_787264.1| dipeptide ABC transporter substrate-binding protein [Tropheryma whipplei str. Twist]  [20-22]
MRKGFSRVFTFTAVSAVLFVTACFGGKPTDSYVNVNTTKISTGLVPANSNELSAHRILSM
LFSGLVYIDKDARIQNEVAKSIETADNRVWTITLREDFKFSNGEKVTAKSFVDAWNFAAK
ISNAMGNRDFLGNIEGFTEKGDTDLSGLKILDEYKFRVILKSPNRNFVAKLSYSVFWPLP
SDAYKDIRAFGLKPIGNGPYSLVSFTQDVEAVLKKNPDYKGPRQPRNSGLRYKIYSDPGP
AYADVLSDSSDVTDIIPPNAQEKFQSDFPSRWIRREIAATIYIAIPGYVAHFAFDREGIL
RRKAVSMAINRQDIADKIYHGARVPARDFTSPSVLGYKAGLPGSDVLKYDPERAKQLWAQ
ADAISPWGSGVLYLNFAATRGDKALFEALANSIKNVLGIEVQAYPNTDWKANLLHGQQTK
QPFRIGWAADWPAIDTYLGSLFHSQASNNYYEFRNAEYDSLLVKAAEALTLPKAQDYYDK
LQEILFQNMPVVPLFYDRGGLVWSKNVSNVESNWVGIPVYYLITKG
>gi|28493117|ref|NP_787278.1| hypothetical protein TWT150 [Tropheryma whipplei str. Twist]  [38-40]
MRLLTLGMLLNYSRFGESPGFRLRALPNRVLPNGILLVSACVIFCKSPCICVVLYLFCQI
GHWHLFLRLLPSNAIEWLKYCQICLVLTRPAASCILVHVLIPREAQMARVSNLYTTNVRT
DRSIGSKTFKVLTSLLIKSLVLTLCVLVFQQPTHAQTPVVSTPIVQGGGIL
>gi|28493144|ref|NP_787305.1| ABC transporter ATP-binding protein [Tropheryma whipplei str. Twist]  [32-34]
MKVPFGVMYTRGGALLMYPAPHGLLDSTSSALAACLALHARIASVAALGEGVSAFVEVMN
VAYRYRGGMCAFENVSLSVKKGQVLGLLGVNGAGKTTFVRLLQGILSPISGSISINGYPP
TSLRAKVICGNAPQTSVFPSALRVSEFISYVSKLYPRSESLSAVLDKFHLKDLKNRKGSH
MSGGQKRQVAVALAFVGFPSLVLLDEPTAGLDISSRRDVINTVKSEISKRGITAIVTSHY
LDDIESLADTVVVLQNGRITHNEPINTLIKHTRGNVVSFFSKSPNRVKNILTKAEKFDIS
GDFVRVTTPDSDNLLRRLYTSDISLRDIRVQSGTLEDAFVELIRKE
>gi|28493214|ref|NP_787375.1| ubiquinol-cytochrome c reductase cytochrome c subunit [Tropheryma whipplei str. Twist]  [45-47]
MGFFVFVNLYSRCVMIRSLCSLLRGNASFFVRRKLRNGLLRIGLIAACLVVTGGTYSALL
QATAFAEQAPASESQIAQGHKLFIANCATCHGLNGEGTQYAPSLVGAGAASADFQLSSGR
MPLRMNGPQALYKPPQYTKDEIAAVVAYVASLGPGPAIPEEKYLTPDGDLVLGAELFKVN
CAACHNVAGAGGALTEGKFAPRIINMPPVRIYEAMLTGPQSMPIFNDASITPEQKRDIIT
YLHYLSTQPSPGGFGLGSLGPVAEGLFAWVFLVGGITAFAVWIAARSD
>gi|28493286|ref|NP_787447.1| putative FKBP-type peptidyl-prolyl cis-trans isomerase [Tropheryma whipplei str. Twist]  [17-19]
MVSLKFVVLTFGLVALLSGCADQGIKVDGKFGTPVRVSIETVVKVKDVTRTVIDEGDGPE
LKSGDLVAYQVAYFNGTTGDRIKPGEFGTARGISTYTVGQGAYLDKILQKVKVHSRILAQ
VPGALLWGSDSRPEGVGERDNAVVVLDVLNVIATKLNGPKKPSPPGLPTVVDSANGPKIL
PVTAPAPQALSVVTLIEGSGHPVKPTDKVTVHYVGALWSGKVFDSSWNRRAPAEFLLDGL
IKGVKDGLVGAKVGSRLLIVVPPALGYGDKAQGDIPANSTLIFVFDILMATSRN
>gi|28493406|ref|NP_787567.1| homoserine dehydrogenase [Tropheryma whipplei str. Twist]  [29-31]
MPLRNSKISGLITKQSSLGSVYILYNRVLGACVDYRSLKLALFGAGRVGSCVARFLLSNA
DELKIRTGGLDIELIGIGVKDLSKSRELDASYYTDDLEGLILRADVVIELIGGLHPAKEL
ITRALQVGADVVSANKTLISEHGRELLALASSVGAQFLYEAAVCAAIPVIRPLKDSLSGD
VIQKISGIVNGTTNFILDRMESTGDSLENALKVAQDLGYAESDPSADIEGHDAAAKATIL
ASLAFHADIPRTLVYREGISNITQETISAARASNKFVRLLAICERMANDTDISVRVHPAL
IDRKHPLAAVRGNKNAIFVQAKLAGPLMFYGSGAGGLETASAILGDVVSIARRYKAGSIP
TSEIWIDNRRKRSVKVSPIDLIKTRYQFVLFAIQSPEALAQIARTFAECKVLLDSLVQSR
VDCSNLHTKLSESDVIMRLVVVTEVVTDSAISSVIVELKNCSHVVSIVSVMRIEQGGFEE
TGLALPETA
>gi|28493504|ref|NP_787665.1| 50S ribosomal protein L30 [Tropheryma whipplei str. Twist]  [52-54]
MLGLAVTRLRITQIRSSVGEKQNKRGSLRSLRLRHVGDTVDCDDTPQVRGYISACSHLVR
VEEIH
>gi|28493527|ref|NP_787688.1| branched-chain amino acid ABC transporter permease protein [Tropheryma whipplei str. Twist]  [65-67]
MLLSLDYLLSQSWITFDVASFIKGFGFATVEGLTFGAIYALIAVGYTVVYGVLGLINFAH
AGVFVTGCYALVFTLSALGFSSFPSKKPIFIVLIYVLIAVFVSILAAAAVAFLVERVAYK
PLRKRNAPNLAFLITAIGASLTISNLFFLRSPNPEPALSIFTPVPLFKFFGATVTSFNVV
TILAAVILMFLVDWFIRRTRFGRGIRAVAQDPNTASLVGVNPERVIALTFVLGGVIAGAA
SLFYVLKVPSGVVYNADIVLGLKAFAAAVLGGIGSIRGALLGGLLLGLFSNWGALLLGNS
QWGDVSVFVLLLLVLLFRPSGILGRSGLSAKSRM
>gi|28493625|ref|NP_787786.1| hypothetical protein TWT658 [Tropheryma whipplei str. Twist]  [15-17]
MGVALQKGAVRFIAITACGIVGVALSLLVTLEKIAVLGDPHHVPACSLSKLVNCLSVLDS
PEASLFFGIPNSLIGLIGFSVVTSFGVFGIAFGTFPQWLWTCFTVGMLSATLFCIFLSYV
SSFLIGAVCLYCVGVWVVSSLGFALGLSPTLHNTRFAILCGYGPLAFGSCIIYFASVLIF
GVFL
>gi|28493640|ref|NP_787801.1| hypothetical protein TWT673 [Tropheryma whipplei str. Twist]  [21-23]
MKRPAAVSVAGGLTGFVGGAVSGCVLGGRLVDDLVNGFNAGFNAVGDFVGKLFG
>gi|28493660|ref|NP_787821.1| peptidase [Tropheryma whipplei str. Twist]  [18-20]
MSTFYKTAAGLVVSALLLSGCFWTPAKNTSSVLSGPLHEKDVPEALRSYYDQTPVWSACY
VGLECTRIKVPLNWDNPAGKNIEIAVARQPIRDTTIGYIFYNPGGPGAGVIDIFSGGHIP
ARPKVAGKYSLVAVDPRGVGESSKVLCYTGRDKDKFLFGASKFPYKSRARAHERDVDFAA
FIDACKRGTGDLLGFVDTVQTAKDFDVIRSVLGSPKFNYLGVSYGTYLGGIYATLFPKKV
GRMVLDSPFPNDLPSDVITAKQLEGFEKSLHAFIDDCLTWKAVCPFTKTRALAERKLIET
TNRLNLKPIPLGDGLVFDGDVFLEGILVPLYSRSSWGILRTALREFFKGNDPKRLFGFVK
QYYGRKKDGSYDNSMEAQLAISCLDNRGDMKVHIPTSGEVKKIAPVFSNLYDPSFDSCQK
WPVKRTGKVLELNARAADNTILVLAASGDNATPYQWAKRFVSYLGKAHMLTRHGQGHGSY
RRGNKCIDSAVDTYFLDGKIPTETDCQPNKQG
>gi|28493723|ref|NP_787884.1| thiol:disulfide interchange protein [Tropheryma whipplei str. Twist]  [44-46]
MRRINSRRNEYRPRHPASLCLSGNPRNCVLFSVSLLLVLSSVILSGCFYSDTQTQTDSGE
YLAGVVKVVAPENRVTRVKFSEKAIDPDGQESTYNSVSYAGKVQVVNFWYAACPPCREEA
PILEEVWSEFKTQNVQFIGVNIRDNADVIKAFARKFKITFPSIIDVQNASVRLAFAGQIP
PNGVPVTYVLDKKGFIAVRILGRITSKSILTTLIRDVSAETDKKTYGT


Letters in green indicate the fragment of the protein where the prediction was succesful.