Organism: Dehalococcoides_CBDB1
Prediction method: PS00013 prosite pattern
Number of proteins predicted : 26

>gi|73747970|ref|YP_307209.1| putative lipoprotein [Dehalococcoides sp. CBDB1]  [1-23]
MKKAALLCLSICFTGILALLGGGCIPGVGGFITGSGEVESQPFDYADFNRVEISNVITAD
ISRADSFEVSVSTNENIFEYLELEKSGQILKIGLKDNYSFTNVKIEASIRLPELVGLDIS
GASKATVSGFNSVNDFTALVSGASRITLFNMRVGQTRLYISGASFASGDLICGNASLEVS
GASRLELSGQGVDIDVLTEGASTVNLEKFLAASAEVTATGVSNIRVYTNGDLYITASGVS
SVKYFGNPIIKDINISDISSAGKG
>gi|73748014|ref|YP_307253.1| putative recombinase protein [Dehalococcoides sp. CBDB1]  [1-27]
MTARQPGNIHPRTIPSQYLLSGLAFCGCGASLTGHSAKSGRHFYYQCNRKFKQGNEVCNG
QAIPKSKLESAVITQIKSRILTEENLENLVSLVNKDLELASVQYNERLAVIDTELEDIRQ
RLNRLYEAIESGKLDYSDLSPRIKDLRSRQSDLEKSRVLAEAELLASGSESIKLEQVKAY
ADDLKQLLAEAEISECKAFLKTFVKKIEINGNEATLKYRLPLPGLKNGKEVLPIETLGGA
GGIRTLYLLTASQTFSQVNYGPSNR
>gi|73748055|ref|YP_307294.1| molybdopterin oxidoreductase [Dehalococcoides sp. CBDB1]  [1-34]
MNKEKPEKNPSGGITRANFIKVSALLGGTALLSGCDLGTKPRRILGSSDYPLSKAEDIIY
STCQQCATQCSIKVKLIDGVIAKVDGNPFSPWNMMPHLDYKTPVTTSAFTDASICPKGHS
GAQTSYDPFRLVKVIKRDGPRGSNKWISIPFAQAIDEIANGGKLFSNVPGEENRTVEGLK
DIWALRSPEITKAIKNDITAIWAEKDATKKSALVAVFKEKHKDHLDKFIDPNHPDLGTKN
NGFCFMFGRTQGGRVDFIKRFTNDAMGSVNAHGHTTVCQGSLFQSAKALSAQFDSGTGSF
SEGEKFYWMADIGKSEFVIFTGASPFEASFGPTSRSMRISEGLDTGRMKYAVVDPRFSKA
ASKAWKWLPAKPGTEGALALALIRWIFDNSRYDARYLANANKAAADADGEPTWSGSSWLV
KIDAAGRAARLLRASDIGLEQGNFSFDTPLVMKQGQFTRFDPNDKVNAVEGELLVDTTIN
GLRVKSSLQILRDEASSHTIEEWAEICGVKADDLAEIASEFTSHGKKAAADIHRGVSQHT
NGFYNSLAWWNLNMLIGNYDWQGGMLKGSAYDIKGGKAGGPFNLGQMRPGALTPSGVNIV
RHGNIYEDTTLYQSTGYPAKRNWYPLSEDIYQEVIPSAGDAYPYPIKALFLHMGSPVYVV
PAGHTALEFLTDPEKLPLLVVTDIVVSETSMYADYIFPDLTNMERWEFAGSQNTIPFKSQ
PVRQPAIAPLVEIVKVFGQDMPLSMETMLLGLAEEMGLPGFGPDGLGQGIPLSHFDDLYL
RMATNLAFGEKADGSDAVPDADEEEIRIFTQARRHMPDNIYNLERWSSLAGENWPKVVYM
LNRGGRFQDYEGGYPADQQLGNKYGRLFNVFLEKTTEVKNSQTGESIPGHACYITAGRDC
YGQELNDEKNGYDLSLITYREIARTPTTASNYYLNPLLPENTILINQQDADRLGLTETDI
VRVVSESNPKGVWNLRNGQEWPMNAKLSIMQGIRPGVIAFSLGYGHFAYGGLDITIDGQL
IPGETKRTKGVNANAAMRVDPHLKNTCLVDTVGGSAVFYDTKVRLEKVNT
>gi|73748089|ref|YP_307328.1| sensor histidine kinase [Dehalococcoides sp. CBDB1]  [1-19]
MTRSLKWRLITLFCLLIAGCVGILSIFLSNHLENSYMDNLQSRLIQEVTLFSRVVPEYIT
ESPDSFDAGVKKLGASLDIRLTVIALDGQVLADSLQLPSEMENHSTRIEFIDALASGIGI
SIHPSASLGYEMLYVATLVKSGQDVLAVARVALPVEEVYAAVREVDRTILLGAVISILAA
GLLAVWVAASVTRPVKELTAISRRIAQGQMDTIQIDVSGKGEMEELAKAFRLMTERLRDS
IKAVSSERDHLSAVLERMGDGIFLLDREGSINLLNHASERIFKLEAGGVIGHSFVEAIRD
HEINAVFERAKSSGKQEMGFVELTAGKRFLGIIATPLVSQSGYLVLVQDLSELRRLEKVR
RDFVANISHELRTPITSLKLLTETLQEGAASDPDVAAGFIDKIHLEVDKLAQLVTELSDL
SAIESGQAVLNLQPGDIRTAIKLAAERLSPQAERAGIILGVELPETLPRVRLDENRVEQV
LVNLVHNAIKFTPKGGKIKIGVRTQSQTLVVYVTDSGIGIPEDDLTRVFERFYKVDKSRS
GGGTGLGLAISKHIVQAHGGSIWAESVYGKGATFSFSLPLA
>gi|73748140|ref|YP_307379.1| serine protease inhibitor family protein [Dehalococcoides sp. CBDB1]  [1-20]
MKIKHVFSLLAVASLFTLTACSGGVSAEELKSDKDRIANPNISQQDANIQAEANNDFAFK
LYHFLKGTEEGNFFYSPFSISIALAMTYAGADTTTKTEMQNTLNYLLPDANLHAFFNFID
QELNKRESQAEEADAGTFELKLVNAIWGQKNYTFLSDFLDTLAQNYGAGLRVLDFAASSE
DARRVINDWVSEATKDKIKDLIPSDGIDSTTRLVLTNAIYFNAAWAAPFEEENTQNGLFY
LQNGSSVSVQMMHQSEGHGYYNGDDFQAVELAYAGNSLSMVIILPDEGKFGQVEDALSGQ
MLTGILASIKYNQINLSLPKFSFESEFALKDALSALGMPTAFSGQADFSKMDGGYNLMIG
DVFHKSFISVSEAGTEAAAATAVTMNLTSAPAEPVTLSIDRAFIFCIVDMATGTTLFTGR
VLNPGA
>gi|73748143|ref|YP_307382.1| hypothetical protein cbdb_A227 [Dehalococcoides sp. CBDB1]  [1-24]
MKSFKVIAPLISLLMLLSLALGSSCSSGTANNDSPDTNNLPVSDTTPTGSQLIASILAAS
PNITSFDTTSVIDMTMQVSGMSIKTVMTANGKEDLSSKKAYLTSSILMTGDLASTMEMET
YLIDSFQYFRITSTDQNTGMQLNTWYKMLMDTQMQTQTWNSQSQQNNYLFSKSSITVDGS
ETINGTSCWKVTITPDLTELIKYLNEQQAIEDPSAITNPADSLKNIKLTAWVAKDTSYVI
KMNMSMDMLIEAQTLSMVMSTTITNINQPVSITLPPEAVNAIQVG
>gi|73748261|ref|YP_307500.1| amino acid ABC transporter, periplasmic aminoacid-binding protein [Dehalococcoides sp. CBDB1]  [1-21]
MKRLSTILMTLLLSSALLFSGCQSSTDDTDDSTATLQITVVTDATWAPFEYVNEQTHAIE
GFDIDLMKAIAEKANLEVTFQNVAWDALLAGMATGQYKVAISSITILPDRLEKWLFSEPY
FNAGQMVCVQKTNTTILSHDDLTGKRVAAQTGTTGFFEAQKIANATVKSYDEIGLAFQDL
INGQIDAVICDNPVAIDYVNANPDKLKKVGTAFTDEYYGISVAKGQTEILSRINLGLAAV
IADGTLDQLIAKWNLNP
>gi|73748412|ref|YP_307651.1| ABC-type dipeptide/oligopeptide/nickel transport system, periplasmic component [Dehalococcoides sp. CBDB1]  [1-21]
MKKILLIILSVCLSFSLLLSGCGYAPEDNTMPTGNNVLTLVGQEPYTLDPAKVSDSGSVT
YIYQIFSGLLKMGDDLTPVADIAQNWEVSPDGLTYTFYLKPNVKFHNGRVLTAADFKYSW
ERAASPATASNTVLTFLGDIQGVTEMVQGQANSISGVTVVDDLTLKVKLVSPCSFFLSKI
SYVTAFVVDKDNVSQGSDWWKKPVGTGPFMLPELTQGNYIMLNSNPDYYDTPAKISSVIF
RLQSGQPMDLYEVGGIDVAGVSADYLAKATDPDGVFSADLQVVSQLSFYYFAYVTSKAPF
DDPKIRQAFSMAVDKARIIELSYKGSVSVAEGILPPGMPGYNPDLSGLEYNPERARELIA
ESSYGSVENLPTITLTASGWGGLLPVELEAVIDQWRQNLGVEVVVRQIDMERFLYDLQTE
KDNLYYSGWVADYPHPQDFLSVLFETTSSYNSGDYSNPEVDALLVQAAATLDTEESMQLY
AQAEQILINDAACLSFWFGKNYVLVKPYVKGYKLNAMGIPILTEVTLEAH
>gi|73748469|ref|YP_307708.1| cation ABC transporter, periplasmc-binding protein [Dehalococcoides sp. CBDB1]  [1-24]
MKFRTLFLSLILGVTLLSSLLLAGCQEETPSTAKLKIAVSIVPLKEFTQQIAGDKAEVVL
MVPPGAEPHTYQPLPSQMVDVSQADMYVKLGSDFGFEQNWLSKILSLNHSMLVVDSSVNI
TLESSLEDSGADPHIWLSPRNAIQMVKNITLGLMSLDPENQSYYAANRDAYLAKLEQLDN
EITLAFSNLYNRTFLVFHPAWVYFARDYNLKELSIEIEGKEPTPQQMIEIINMAIQNNIS
IVFASPQFSSRSAEAIASEIDGRVVMIDPLAEDYITNMEFVYKQMQEVMS
>gi|73748616|ref|YP_307855.1| phytoene dehydrogenase family protein [Dehalococcoides sp. CBDB1]  [1-19]
MSSKKVIIIGAGLAGLSAGCYSRMNGYATRIYEHHSKPGGVAACWRRGEYLIDGGIHFMM
GSQNGTDLYNIYRQLGVADPANFVPMKSYGSFIDIEGSRQLDIPLNISELALDLKMLSPA
DAPLIEDLATAVTAFSGKDLAIYGQMNPPELTSGLDKLTDMWKMRKLFKYMSGKYAKSMQ
DYTAGMQNRWLAECLNNLFTPQCPVWFVIMLLAIAADGQMSYLAKGCKDFVRQIEKRYKD
LNGEVTYSSTVEKILVRDDCAFGVKLADGTEDYADYVISAGDIHNTVFHLLDGKYIGKKL
QNKFDTCELSRPYFVASFGVKWTFENESVFNTLILKQPLQIGNREIRQIFVRIFNYSNHF
APKDKSVIQAEFETEWDYWDNLRQTDPNKYAAEKERLVSEILVNLEILYPGISPLVEIAD
VATPCTLNRYTLNHQGAPEGWGLTSQNFKEETRRSLEGLSNLYLAGHWVSGGVPGVILSG
RQAIQLVCAKEKKPFFTRTT
>gi|73748710|ref|YP_307949.1| putative branched-chain amino acid ABC transporter,periplasmic amino acid-binding protein [Dehalococcoides sp. CBDB1]  [1-27]
MRLGKSEIGFRIFMALVLTLVPVVLSGCNLDNITGNNNNDPLVTNKTLKVGLSVCYTGPA
AEKGTPQGNAKLDAIKYINDELGGVNGYKIEPIFRDTKYDTAIAVTVINEFISSECLFFT
TNSSKDMQASMEIANRAGFPGFTTFSSPSLTHPPQHIYSQLPDYGDDWVAFMKYYMENIW
QGEGKPKVALMILQNPTGYGARDAATAMAAELGVEIVGIYEHSTTINDDTANLLNMKNQN
PDIVYISSTPQPTSVIVKQMIELGIYPGVQIGCGHGGFTQSLVELLGADKAEGILGVYPT
VSWDENVPAMAKMKEYCLKYHPENYGNMDYIVSWSEGLIIAEILRLAIENSPGGVNSLTP
QIIEEFGIKRLNGYDVGGLHGPVSYSVGDNRLVKSVRVFKIEDGQLKVISGWIETPSIAY
ENFDWFGK
>gi|73748711|ref|YP_307950.1| putative branched-chain amino acid ABC transporter,periplasmic amino acid-binding protein [Dehalococcoides sp. CBDB1]  [1-31]
MLGQNRKQLIKRGALSFFSMLLLLFSVAAGGCGTSETDVNNPDGTVKPTLKVGFSIPYTG
PAAEKGSVMGNAKLDAIKYINEELGGVNGYQIEVLWRDTKYDSSLAATIVQEMMDKECLF
FTTCASKEMQASMEIANRANFPGFTVFSSPVCTHPPKHIYAQLPDYGDSWASFAKYYMEN
IWQGEGTPKMALMILQNPTGYGARDAANALAADLGIEIVGVYEHSATITDDTANLINLKG
QNPDVVFISSTPQPTSVIIKQMNQMDIYPGVTIGCGHGGFTKALIDLAGVTNTEGIYGVY
PTVNWDEDVPGMAKMKEYCLKYHPDNYGNMDYIASWSEGLMVAEILRLALINTPGGIDNL
TPQAIEEYGIKKLNGYAVGGLQGPVSYSSGDNRLAKAVRVFQISGGVMQVLSDWVEAPLI
RYEDFSWFGS
>gi|73748798|ref|YP_308037.1| serine protease, DegP [Dehalococcoides sp. CBDB1]  [1-26]
MKKLFKNFFGLFISISLVLSMLLAQGCDILQDFSNSPEDNTQNQTNTQNLPDQSDEIGSV
PSPVNFVNAVKAVKPSVVSINVELVTRDIFGRTIVEQAAGSGWIIDSNGIIVTNNHVVED
ATSITVTLDDGRTFNSVAVRTYPANDLAVIKINATNLPAVKLGDASKLAVGEPVAAIGNA
LGMGISMTGGWVSRLNTTVEFSDTESLTGLIETDAAINPGNSGGPLVNYQGEVIGITSAK
IQEVGVEGIGYAISLYIALPIINNLISQLPA
>gi|73748799|ref|YP_308038.1| serine protease, DegP [Dehalococcoides sp. CBDB1]  [1-25]
MKKKLHLFSLFLCILIATAAFSAGGCDYLSQPINTDNSDNTPSTSTPLDENWKFPSPQQN
LPELANYAMVVARVKPAVVAVDVEYITQDIFGRQTVAIASGSGFIIDPSGYIITNNHVVE
GGSTVTVTLSDNRTFTASRVVTDSRTDLAVIKVDTLGEELPFVYIGDSSALEVGEPVAAI
GNALGLGITMKGGWISRLDAQITVDQSVTLYGLIGTDAAINEGNSGGPLVNMAGEVIGIT
SAKIVEVGVEGVGYAININSARTFIEELVNKGYITRPFMGVIGILTVDAAIQSYFKLGID
KGVLLRGIAENGPAEKAGLKANDVILSINGQAVLTDEELILAIHGKKVGDKIEVSYFRDG
VTSTVTLILAETPPPES
>gi|73748803|ref|YP_308042.1| hypothetical protein cbdb_A1016 [Dehalococcoides sp. CBDB1]  [1-26]
MFKTNRISKKLILLLSLIGVLAVLSGCMGTGQKPLGWSGVVVSDNDAIFGSMTGKLIALN
KDASTPRYQVPLETTTSGGGCAGAVTTVGIYGTPVISDGVIYISTYGGKIYAYNQDQGDL
KWVYPVTDALPAIVSGIAPNGDKIFFADTNGVVYALSKADGQKVWEYPTGAKIWASPVVS
GDLVIVPGFDKKVYALDINTGNPVWTFEAKSPFASAPVVDNGTVYVGCFDRNMYALDLTD
GSQKWVFASPNWFWASPVIADGKVFAPNLDGNTYILDALTGTQLKVINMTDGVASSPALL
GDNVIVATKTGKIFSINIYSLEMKAVTDLALKVIAPVTVSGEVVYIHTQEKETVYAINPE
SRTIIWTFVVS
>gi|73748822|ref|YP_308061.1| ABC-type dipeptide/oligopeptide/nickel transport system, periplasmic component [Dehalococcoides sp. CBDB1]  [1-22]
MKGKLLYLLAALLIIVPIVFSGCTSDDNDDDGDDGTVTTPQVFRVNLAGEPNTIDPNKAS
WATERSVIMLLFVGLLDFNSDLSLKAACAQEIPTVANGGISADGLTYTFKVKSNVTWSDG
SKVTAHDFEYSIKRMLDPDTAAEYASFYFDIVGAAAFNAAASADAATKTALRNAVGVTAV
DDTSLRITLNQTRPTFLSIMALWPTSPVKESVITAKGNLWTEAGNLIGNGPYTLKEWVHQ
DHMTFTLNTNYWDTKPTLTEIKYLMILDATQELSAYKNGELDMARVPVGTETATLADPVY
GKQVVRNNDLTTFAFQFNVNKAPFDNLLVREAMSCAIDRVAFVEQVRGGVGTPAYSWIPP
GMPGYDADLGKDFAFNVTKAKQLLADAGYPNGVGMPELKFQYADTASNRTIAQFLQAQLK
TNLNLDLTLEPMEPAAFSAFVNSEQHTWAWFGWGADYPDPDNWLPDLFGTGGGNNHTGYS
NPAFDTLAIQAMMELDNTLRLQMWAQAQEIVMADMPIVTMFYRERFYVVQPYVKGLEPTG
MDGGIMGDTSLVNVSIVK
>gi|73748881|ref|YP_308120.1| hypothetical periplasmic protein [Dehalococcoides sp. CBDB1]  [1-24]
MNKKILLPIVSGLLVVSLAGGIAGCASGTTDETDNTDSPGVIWSQQNTGIWVNGSGEVTV
SPDVAILTLGVESMGVSIDAAQTQAAQAMNAIINSLKANGVLDKDIKTSSYYIYPVTEWT
DNRSTIVGYRVSNQAEVKIRQIAQTGSILDAAVRAGGDDSRVNGLYFSIDDPAAAYEQAR
ALAIQDAKAKAEQMASVAGVGLGKLIYISETSNYIPRWDYAKDAGMASSVPEVTPISSGE
TTVTVSVQAVYSIK
>gi|73748926|ref|YP_308165.1| probable peptidylprolyl isomerase [Dehalococcoides sp. CBDB1]  [1-21]
MKSTKALILATLFPVTLFAGSCGGDAVPEVTPMSWTTAPAMQIDPAKQYYATIETTLGSF
KIELFASESPKTVNNFVFLAKQNYYNGVIFHRIIKEFMIQTGDQTGTGRGGPGYRFADEL
PVKHSYDPGIVAMANAGPNTNGSQFFVCTGAQAKNLNYQPNYTQFGRVIEGMDVITKLAS
VSVVGNSYGEVSTPSNPPKIIKITITES
>gi|73748943|ref|YP_308182.1| hypothetical protein cbdb_A1182 [Dehalococcoides sp. CBDB1]  [1-20]
MDWGILKIILGIVILLAVGACVLLLADPLPVPGIFRNSSGEKLDKDDLSEVPENICNEAA
KLAVQFFPDNPAKQSEYQKNLLAAYLTIKNIDLLLLFNPGGFGYARISASKGWESITTGI
SELTKSWGLRTLVLDYQRTAHSLTGKFSEVLASSSHSVSKARELSSKLIFLLKYLPNLKI
VLGSESNGSVSANNTLLFLKDNPSVVSIETGPPVWHKGFDHERRLLLRSNGLVPDSFSYG
DIKTILSANFMALFGRSPKSPGNVLLYIGAPGHEYSWEHAEVKNQITNFLTNKLKT
>gi|73749011|ref|YP_308250.1| ribosomal protein L31 [Dehalococcoides sp. CBDB1]  [1-18]
MKEKIHPKYNTATNVICACGNTFTVGSTKDNIKVELCAQCHPFYTGEKRMVDTAGRVEKF
RQRYGSKT
>gi|73749075|ref|YP_308314.1| rhodanese-like domain protein [Dehalococcoides sp. CBDB1]  [1-23]
MSFKRSLTAVLALCMVFTGTLTGCDTDRTDPLDNTDSNLPKVQDISVDEAKDLIDRNTNS
TEFVILDVRTPSEYAQGHIAGAVNLDYYASFENSLFALDKNKTYLVYCRSGNRSVSASQL
MVDNGFTSIYNMLGGINVWIANGLPLAT
>gi|73749139|ref|YP_308378.1| hypothetical periplasmic protein [Dehalococcoides sp. CBDB1]  [1-21]
MKKFAGLILSLVCAFSLAFSGCSAQVKTYTADDTLIECHTGDEFIVALPSNPSTGYSWDF
ESVSSKIYLVEKTYTPDNADTALVGSGGTEYFRFRALDKEQTELWFYYSRSWDAVPLETL
VINLKVS
>gi|73749166|ref|YP_308405.1| peptide ABC transporter, periplasmic peptide-binding protein [Dehalococcoides sp. CBDB1]  [1-27]
MIKNWKKFKKVWLIGLAAVISLSLFAGCEQTTPNADDTATAVTLKVGSTKPFKTTNCFSD
YWYGVLTNLTTHDSLIRLGDDMSIKPWLAKSWIVSDDAKTFVFTIVDNAYWHDGTKLTAE
DVAFSVEYYRDYIASASWMKDVIADVSFSGDTVTLSLSRPYGNLLTEFMTYSIVPKHIWQ
DVTDPLKYNQTDMTVGSGPFVFESFDLSSGKFIFKANEDYFQGKPTIDRLEVDIYQNMDA
LVLSLAKGDIDTWWDYSGTFPYTSIPALIKSGKVDFETSTYLGVPSALGFNLEDGPASDI
NVRKAIAAAINYQQIIEYFYAGYGSVPTTGFVPPTHPNFNADLPSLAYNPAEANALLDAA
GLLDTDGDGIREDSSGQNIFLRLLARSDQSTNMRLAEILRDALSEIGLGVEIRALDLSAW
ASVKDALDYDMVLFGATPWGTLMHAGHGSGYFDSRRTGQGVLHNLAAAEYLAACDARLAT
ADPAQQAVLDLRIQELTAEYLPGIALAWTESVYPYRQGWSGWVIDSIYGGVFNGFSFLSV
QSP
>gi|73749201|ref|YP_308440.1| hypothetical protein cbdb_B34 [Dehalococcoides sp. CBDB1]  [1-18]
MRIIKTIGITVILIILSGCMPAVTEDTEDIYCPDDNIQVASILLTDHLDEFSQPTEIKSM
VFAHTITELFLVFTLTDDLCCHTLNVAVLDSKNNVICENLGIPKQFPAIAYLIPDGQFTP
GEYRAIIYIDIVPKWETYFVIL
>gi|73749205|ref|YP_308444.1| hypothetical protein cbdb_A1505 [Dehalococcoides sp. CBDB1]  [1-25]
MKSVRFINIGLMPVLLSGIMLFGSGCGDTAKDTETVPYTLDYAKIFNAYTSSAIDSEGIA
ADRCDTFTSDIPVIYFSWQPRSLDVCCAATSVVWFFEGEEISSISLIDSSTCVHTASLER
PEGGFLKGNYQVVLYIGINEYFKLDFTVVRN
>gi|73749286|ref|YP_308525.1| hypothetical protein cbdb_A1585 [Dehalococcoides sp. CBDB1]  [1-25]
MKSVRFINIGLMPVLLSGIMLFGSGCGDTAKDTETVPYTLDYAKIFNAYTSSAIDGEGIA
ADRCDTFTSDIPVIYFSWQPRSLDVCCAATSVVWFFEGEEISSISLIDSSTCVHTASLER
PEGGFLKGNYQVVLYIGISEYFKLDFTVM


Letters in green indicate the fragment of the protein where the prediction was succesful.