Organism: Pyrobaculum_aerophilum
Prediction method: PrediSi combined
Number of proteins predicted : 22

>gi|18312574|ref|NP_559241.1| Rieske iron sulfur protein (parR) [Pyrobaculum aerophilum str. IM2]  [1-31]
MVDENRRNTLKIFLGTTAALGAGMLATPLVASVIGSKAGYIKPEPSGAIPVEICKDVDSC
PKDYGVSLDELRNGPVFKLLKVNTMAIPAVFGIVRAKDGKEYPVAYVAICTHFGCPVNVS
GGKYLIGFNCPCHGSIFAICNDPNGCPDYNAAFLEMYVSGGPAPRSLRAIKVAVKDGVVY
PLVAYI
>gi|18314242|ref|NP_560909.1| hypothetical protein PAE3682 [Pyrobaculum aerophilum str. IM2]  [1-26]
MHGLKAGLLGSIAAAVIILAILPAVANYGVFYPPALVLMTILVAIALYVYFSFKRALGER
WFSRLGPPVIAASAAGVLMLWLGEPLGAGVIAIAYFGEPVLGYFVYRKLLSTDKTWAAIF
LASAAAYAYTLPAVLIGLWHLPFVADFAKLIALIKLAQKV
>gi|18314190|ref|NP_560857.1| hypothetical protein PAE3608 [Pyrobaculum aerophilum str. IM2]  [1-28]
MREIKLLLFFTLPLLAFFGLLSGPLAEAGVKEALSRYLSIGPGEEDFAARVIMAYHIAAV
VVMAGTLYLAAKYVDHEPNTGRIAVNLATAGWLIAVPSDLAFAYFGRSPLAHGLWLVGLS
LMFAAGLVFLYSISPWRLSWRERTLERATAFTVGATLLIAVIMGAIYAAHLGFDENVKIY
ILEEHSTREYRGLAPASTPLQLLISGHAHAAVALWAAAVMFIGMKWARMDNWRPKLYKIT
LALTAIGALITLIGSAAVAVVRPIAHQIIFGGIGPLHLALFFLWLRLGGMLKGGGWRDPV
KLGLFLVPIWTVVFVTSTGPMLASQTKTVRLVWPLEDEIAYNVAHWHMLAFIIASAMFLL
YLSEFAGRIRQISGFLLAIGGTIALAGAFIYELSPLFARKAGVQLAPASAALKKGILPVI
DAGLALSFAAFALFVLWLFVKTVRKA
>gi|18312578|ref|NP_559245.1| cytochrome C oxidase subunit II [Pyrobaculum aerophilum str. IM2]  [1-28]
MPFHGEEKIWVGVVAAMTIIFLGALAYAAWVIGLQVPGGDVQLVDPQKALTELRPGVREI
APGRYEVTVVGRMWQWFPRNITLVDPVEVKFRLTALDVIHGFQIVGTNVNVMVFPGYVAE
ITWKVPPDAKGTYLVICNEYCGLGHHEMYGFVNIIRTK
>gi|18311894|ref|NP_558561.1| hypothetical protein PAE0367 [Pyrobaculum aerophilum str. IM2]  [1-26]
MAQTQKILYTILGAAILAALAGLAVAIATYQSLSGLLPSLESRLGDISSSIKSLSAEVEG
LKAALQARESQLASLNRSLAELAREVRTLRQVAGSPAGVVEVRYARLFTITYEGSVYILT
DAMGRRILLVPRGMAQDLAAYYTDKYKPAVVIKYPMERAVYMSSTHVAMAYRLYKEADNA
GVLKSIVGIMWGKEYDWYLPEVAEMLKNGSIADVGPAYSPNYELIAKLKPDVVFVYFYPG
PYGTESVIKKLEQLGIPYVVINEFQEGDPLGRAEWIKFIAAFYNLTSAAVGIFNGIENKW
RGLVSLVADLDRPRVAWFIIYGGVLYPAGAGARELIRLAGGRYAYANYSRVDLEVVLKHK
NDVDILVWSGYGVKTIDDIIKIEPRLKELRPVILGRVYAYSPAFYQLSNAYPEKLLEELV
WIIHPEAAPPGNFTLFVKLK
>gi|18311839|ref|NP_558506.1| hypothetical protein PAE0292 [Pyrobaculum aerophilum str. IM2]  [1-48]
MSQPTRNTQNKLREIKNFEELIKRREFLANISASFLLAISLNPLMALAYAPRANELSGEG
YCVEIKEVDEKRSHVANVTKAVIHVTNYKGKAYVLHAWVVKHANQTILQPSVAVFEEGDK
ARFIGIGDDTEHVMGEIERKHTPKEYLSEVRDKALKEKKQKVVRTVDIIMRVYYGEATRG
PDNKSGEEL
>gi|18311821|ref|NP_558488.1| hypothetical protein PAE0268 [Pyrobaculum aerophilum str. IM2]  [1-27]
MLFAALISSVLVNFALSLAAIVGVVTAAISPALLTLGILMLLYIYKVYKAARVRDTTALK
SRNFIGWVIIALFLGIVPGVMLLLTCSSVEK
>gi|18313571|ref|NP_560238.1| hypothetical protein PAE2762 [Pyrobaculum aerophilum str. IM2]  [1-31]
MDVDAAKVLGGLGAFLAAIGFFAGWPASVVGVVLLYVALAELRIGVGEDRSKWLVYAIAA
LVAFGIAQAILGFSLERLRTWWELPARGLALAVGLAAWVAGWVLQVASAYRLRPILAALQ
SRIGESLFSIANTLYWWGSALAVVAIGLIIVAVAYILMGVGLIVAKTQ
>gi|18313409|ref|NP_560076.1| hypothetical protein PAE2529 [Pyrobaculum aerophilum str. IM2]  [1-31]
MEYRVVAYLAVFTGLGLALAPLSFPVGPTRAFPGQHFVNGVAGVVIGPWALAVAFLISLI
RNMLGLGTVFAFPGSIPGALVVWLAATALRRFGKAHYAPLFEPLGTLGLGFPAAAYVVAP
LLGVGERFITGLIPIFIGWAASTITGSIAAFFVAVALRRLGRL
>gi|18314195|ref|NP_560862.1| nitrate reductase subunit, conjectural [Pyrobaculum aerophilum str. IM2]  [1-28]
MRRDVVLPGIALAISLLLAFMGVVVVTAQQGVVTVKYIAGPLPADPFSNLWPAPVEVPLT
SQTLVYPLPAATETRSIGVSAVYNGTHIAFLLTWSDNTQDVATPGGLDVFPDAVAVQFPV
SKAQLPYICMGTVDNPVNIIYWRAGFGAENLVAGAGYGLNPQQREALGLQATPASPVELL
PASAQVINATAAYKDGKWYVVIIRPLGSVHPLMASLAEGFSAAFATWDGAKGEIGGLKAT
SGWVTFQLEKPVAPTAPATQTVRETVTVTQTVTATQLVETTPTWAWAVIGVLIAVIALLA
GLALRRK
>gi|18313798|ref|NP_560465.1| ABC-2 type transport system, membrane protein [Pyrobaculum aerophilum str. IM2]  [1-35]
MRAGLYLAVRYYTRYFALSLGFSLLAPLLSGLLYAVGWVTTEGRADLDKFLYQMVGLVLL
MVAQMATSSFLWELYNLMAGGQLEYLLASPTHPLLLLVAYYVVQLAVFGSGFALSAAVVV
AAIKGLAYGIATLLSVFIAAALSLPLIGITLALAYLLPSLRDPSPITSLLNVGVVFFGGV
LYPASILPEALQLISALLPFATWAEFVKMVALNLQAPIRLLGPIGGYMLYFALGVFIWSI
LIGTMRAFGRYYV
>gi|18311902|ref|NP_558569.1| cobC aminotransferase, conjectural [Pyrobaculum aerophilum str. IM2]  [1-21]
MPILTGVIAVCAAMHGGSSWADPPVPDFSDNSNPLGPPRELIRLVKEAVERMAYLKFPAN
LVEEALSEYEGVEVTAFNGATEALTVLLASLRPRRVLIEWPNYTDYGRIAELIGAEYVYV
DNFNSAGPGDVVIISNPNNPTGRLRKREEVLDLAGQLERRGAVLVVDESFIDFTSEPSAA
PDVLVVKSYGKFLAAPGLRLGGILGRVRGALKAPWRVNSIADYAVFHLGASAMRRHREAT
VKYVAEESPRVQRELGKCASVVPSPVHFFIVKGPMPQGVKVRPLTTHGIEGAYRVSIKTR
ELNDVLIKAVCREVS
>gi|18311968|ref|NP_558635.1| hypothetical protein PAE0477 [Pyrobaculum aerophilum str. IM2]  [1-29]
MANWVLYVGIIVVVVVGALWLVLSKPGQAGEVVLKGRLAAVVTDYVNKTSRTDYFLQVVE
DGKVRDVPLDLSNATIRLKDFFNNYIGTGREVYVRGYWRGDVFVALEVYD
>gi|18313564|ref|NP_560231.1| hypothetical protein PAE2753 [Pyrobaculum aerophilum str. IM2]  [1-61]
MAPWPPLICCPYFLAAFILAHNVVVFALLASMPRSLGYATLFAVVAMFTLIAILLPPAAL
AMAPWPPLICCPYFLAAFILAHNVVVFALLASMPRSLGYATLFAVVAMFTLIAILLPPAAL
AGFVLFAPLKLSAYVLAVGRSIKMGVVVLIISALLEARVIMDACSTAH
>gi|18312019|ref|NP_558686.1| hypothetical protein PAE0567 [Pyrobaculum aerophilum str. IM2]  [1-59]
MHRDKVVGLALMAIGVAGILIYGWLVFLSPWQFLILQLTAFIAVAAVLGILAWVGYALAT
TPPPKPIEEIEREVQKALEEIERQMKEESSQQASQ
>gi|18312608|ref|NP_559275.1| branched-chain amino acid binding protein [Pyrobaculum aerophilum str. IM2]  [1-31]
MANAKTLWIVAAVVATIIVGALAWLATQTPAQTPTTPPTTPSPTPTTPKVTTTPPTTTPT
PTPTTTQAGECPDEIVIGTAMPISGRYAAEGQYSLWGALAVVNWINDQGGLDCGGKKVKV
RLIYRDSESKLELAQSITEALITQDKVHFLLSPYGSDLALGVSPIAEKYGVIMAVVGASS
DRIFQQGFMYVIGVAAPASQYMVPVLDMIVKKDPSVKKVAILYRDSEFNRQVAEGAKAYA
EKLGLQVAVYEVYPSSPKDLTPQILKVKQAAPDVIIVASHFADGQLAVQQLAEQKVDAKI
IALSVAPLVPDFYNALKEKAECIVGPSHWEPGVKYTPDLAKQRGVEWFGPTREEFIQYFK
KVAKQMGGQEVEPGYHAAWAAEGVLTILYGVQKAMSVKSDKVLSVLQKARFMTFFSEFKL
DPTTNLNVAHSMAVIQWQDGSRVVVWPPDVAEGKLVYPALTWDQKASGQRCK
>gi|18314193|ref|NP_560860.1| nitrate reductase alpha subunit (narG) [Pyrobaculum aerophilum str. IM2]  [1-26]
MLKTTRRRMLAGVATISAAAWVMALAQNLQYLQPLAQFVNTRLQYPDRSWEELYRRRWQY
DKVARSTHGVNCTGSCSWNVYVKDGLIVWELQATDYPDISPDIPNYEPRGCPRGASFSWY
VYSPLRVKYPYVRGVLIDMYRRFKQETGDPVEAWRRIVEDPANRAAYQKARGKAGWARVT
WDEALELISAALIYTIKKYGPDRIYGFTPIPAMSPVSYASGARFIELIGGAMGSFYDWYA
DLPPASPQMWGEQTDVPESADWYHAQYMIVWGTNLPMTRTPDAPMYTQARYRGAKVVVVS
PDYSEHVKFADLWLPALPGTDAALGLAMAHVALKEFYVDKQFKCLREYARRYTDLPFLVI
LEPAGDGTYLQGRFLRASDVPELKDKVGGNPEWKTVVLQSDGTLAAPYGSIGFRWDGSGK
WNLELKGITARGEGDIDPVLSVMEVGKYEKVPVKFFAMDFDVKSTVREVPAIKIGDKYVT
TVFDLLAAHLGVKRGDLGGDYPADYNDPKPFTPAWQESITNISRDLAIRVAREFMSTAIY
SKPVYGKPGDPPFFGDDATPCGGRAMIFVGPGINHWYHADLIYRSVLLLVLLGATQGKNG
GGWAHYVGQEKIRTLIGWSTIAFALDWIRPPRLQNSPSYWYVHTDQWRYDPVTTKLYAAT
WAKKWGDIHEMDANVIAVRLGWLPFYPSLNVNPLELGDKLVSEAKAQGVPDAQLGQYVAR
RVAQMLKNGEIKLAIEDPDAPENWPRVLFVWRANLLGSSSKGHEYFLKHLLGTDNNVMNR
EYAVEEGLVKEVNIRKPAPEGKLDLLVVLDFRMATSAVYADVVLPAATWYEKYDLSMTDL
HTFIHPFTPAVDPPWEAKADWDIFKELAKKFSELARKYLPQEAYDVVLTALLHDTAQEIA
QPFGEVKDWKKGEVDPVPGKTMAAVSLVRRRYWDVYDMYITLGPLVVTMGLSTKGIPAFK
PVESYNWLREINGLTSATSQFVQAQCANVGGCPSIERDKQAAEAMLAISPESNGEVAYMA
WSNLEKVVGLPLKDLPAKEHRIMFNDIVAQPRRVTTSPVWNGIEAPGRTYSPFTVNTERK
VPWRTLTGRQHFYIDHEWFRELGESLPVYKRPLDQVMAKLIADVNLSDYWYDPAKYRVET
PGGKYLVLRYLTPHGKWNIHSTYWDNLIMLTLFRGGQVVWINDEDAKWLGVKDNDWIEVY
NANGVIVARVAVSPRIPRGTAIMYHAQERHVYVPISPKTGKRAGIHNSVTITHLKPTKMV
GGYAQLSWSFNYYGPTGVNRDTLVVVRPAGRVRL
>gi|18313667|ref|NP_560334.1| spermidine/putrescine transport permease protein [Pyrobaculum aerophilum str. IM2]  [1-60]
MIKKLALTAFASAILLFYVPFLALGYYLSEGGLLKLPSLSMVATTFLLAGLTAVISIALA
YPAAYYLAKRGSELEFALLIAPLWVGTLLKAYSLLVLFTIIERYTGIVLWGSILGVLVGM
IYEYFPYALLTLYAAIEKLSETPVHAARVLGASRIEAFLRVELPLTMPGVVAAFILIFLF
ALGEVIMPAVLGGWKIYTFGSYIWDLYFKARDIFSGSILSLLLAGLSLLATYLVVRTIRS
FSL
>gi|18314235|ref|NP_560902.1| hypothetical protein PAE3670 [Pyrobaculum aerophilum str. IM2]  [1-35]
MLSIYSVYAEERRGLIVGIFLTAFLSTLALTAAFAFWDLGGALAADLRDLLGLGRYVIMS
QEGAGLTWADVAKAAAAVCSDRSYGVTYLPLKIAYLNGTERWVTAAFLPRWAMEGIALLE
VAASQALAREGDMLYAYISGKPLLVTVARALRGQIYVPGLSADLYLDSDLIGASHFNVIV
VEKGSCGSVEDLRALFPGAVVLDTDALLTAFWGQLLIYLAGAAVVAASATAAVAAMSYAL
ATSALQAHWKDFAIMRVLGMKKQQLLALAALLFYTPALSGVVAAAFLAGGIEVEGLGGMA
YSAIKAAAVVGASSALPLFPAFRRLYSMHPVEALRHE
>gi|18314189|ref|NP_560856.1| hypothetical protein PAE3607 [Pyrobaculum aerophilum str. IM2]  [1-55]
MFGVVMSIVAALALGFGLFCLWRCVKTKELADLFVSIGAFVLAALALLLATQGLAALQSP
LAAPLGALVPLLISLGVVKIAAAKWWKWYAVFVLVGLIAISVARTAVSVVHSIAGLVIVI
LPIYAVLKKKLPPHFIGVSIGGVLIGIGGVALASAVMARPILPLETVVALLPWILLLMTV
FYAYGFILGVRK
>gi|18312889|ref|NP_559556.1| P. aerophilum family 59 protein [Pyrobaculum aerophilum str. IM2]  [1-29]
MAVIYKVKITSLAAASLAVIALLAALSHAATPGEFRGPIVELKEICIKAGALGLAGRSVH
EVAFLSWLGDGFIPLPYRVEAVEISVAPLLINRTDAEKYAFKSHTLPPRFENDTTVCISI
PKKTARPPPRAPRGGDLYQISDAYVVVSPRQPYDPPPVPVVGSKRDSVPVRKAGVVEAVG
AGAEPLSAVSAAVKTISGGFKTIAASNTTVAANGVTFTVTPIDLPNGTRYIWLAFTNVTQ
PGSYSLYYKVYDAASNAVYFEGTVTAAVDGRSPYYFVISIPVYQKAYNNLLKLYIAIKNH
NPVPRAVDLVIVGIFDTSRHMDNRWVAGMATTNTYGFPEYVVPIRDGYTAIPVHIPPGGV
HGTEKVRVRLGLRICSSNAPSSLTVDVYLRPIWVGSLTFTYSYRDSWGCAVYNTAQGTYT
GFLPMPYLLLGTTDLAIGPLPAGARVTVYELYVEGYRRPEFNRPWSPAIYDSTWLDGTFV
INSVLKAETYIYTNLRTGQFTDVYIRLALSPIVTPNGVVPLSPGEHIIHYYIYATGLSQP
DKSDAVEGRQETLVDKLLPIVRRINAILSALGFVIDRTVQDAPKKVAYKVVTFAGRVTEQ
ALSSAKTKVEVYPNYVRINVGWEETKNAVIVSIRYSMIARSDLKTDIGWFKSPYTTISND
LFASSNAYSIGFIQGVDIYRTWYCLYQDISPGTVCDASTYR
>gi|18312984|ref|NP_559651.1| hypothetical protein PAE1944 [Pyrobaculum aerophilum str. IM2]  [1-45]
MTEAKVEQRVKVEEVSPEERRWAVALLIMGIVSMLGLFFGPAAFATRGEGGARAAVFGVG
VNGSHWVEAAPGSIVVFEMPLCNLADKPAAVWARVSEVPEGVRVFAVYVNGSFFGVKWGN
RSEWRWVLPPGACVPARVEVLVDANVPSGKTLRVVAVFNPTFLS

Letters in red indicate the fragment of the protein where the prediction was succesful.